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    Skap2 src family associated phosphoprotein 2 [ Mus musculus (house mouse) ]

    Gene ID: 54353, updated on 23-Jun-2021

    Summary

    Official Symbol
    Skap2provided by MGI
    Official Full Name
    src family associated phosphoprotein 2provided by MGI
    Primary source
    MGI:MGI:1889206
    See related
    Ensembl:ENSMUSG00000059182
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    RA; RA70; SKAP; Saps; mSKA; Scap2; AA960083; BB137539; SKAP-HOM; mSKAP55R; 2610021A10Rik
    Expression
    Ubiquitous expression in placenta adult (RPKM 10.2), liver E18 (RPKM 9.4) and 28 other tissues See more
    Orthologs
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    Genomic context

    See Skap2 in Genome Data Viewer
    Location:
    6; 6 B3
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (51836145..51989529, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (51859165..52012549, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 6 NC_000072.5 (51809164..51962548, complement)

    Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 38811 Neighboring gene VISTA enhancer mm412 Neighboring gene ribosomal protein S8, pseudogene 3 Neighboring gene Hoxa adjacent long noncoding RNA 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in cytosol ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    located_in plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    src kinase-associated phosphoprotein 2
    Names
    SKAP55 homolog
    SKAP55 homologue
    Src-associated adaptor protein
    pyk2/RAFTK-associated protein
    src kinase-associated phosphoprotein 55-related protein
    src-associated adapter protein with PH and SH3 domains

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_018773.2NP_061243.1  src kinase-associated phosphoprotein 2

      See identical proteins and their annotated locations for NP_061243.1

      Status: PROVISIONAL

      Source sequence(s)
      BC003711
      Consensus CDS
      CCDS20137.1
      UniProtKB/Swiss-Prot
      Q3UND0
      Related
      ENSMUSP00000145462.2, ENSMUST00000204778.3
      Conserved Domains (3) summary
      cd13381
      Location:117222
      PH_Skap-hom_Skap2; Src kinase-associated phosphoprotein homolog and Skap 2 Pleckstrin homology (PH) domain
      pfam00169
      Location:117215
      PH; PH domain
      cl17036
      Location:300352
      SH3; Src Homology 3 domain superfamily

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000072.7 Reference GRCm39 C57BL/6J

      Range
      51836145..51989529 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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