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    Cks1b CDC28 protein kinase 1b [ Mus musculus (house mouse) ]

    Gene ID: 54124, updated on 23-Jun-2021

    Summary

    Official Symbol
    Cks1bprovided by MGI
    Official Full Name
    CDC28 protein kinase 1bprovided by MGI
    Primary source
    MGI:MGI:1889208
    See related
    Ensembl:ENSMUSG00000028044
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Cks; Cks1; sid1334; AA407784; 2410005G18Rik; 2610005D03Rik
    Expression
    Broad expression in liver E14.5 (RPKM 95.5), CNS E11.5 (RPKM 87.4) and 16 other tissues See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See Cks1b in Genome Data Viewer
    Location:
    3; 3 F1
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (89322779..89325598, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (89415472..89418291, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 3 NC_000069.5 (89219394..89222213, complement)

    Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene lens epithelial protein Neighboring gene flavin adenine dinucleotide synthetase 1 Neighboring gene src homology 2 domain-containing transforming protein C1 Neighboring gene pygopus 2

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables cyclin-dependent protein serine/threonine kinase activator activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    enables cyclin-dependent protein serine/threonine kinase regulator activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables histone binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    enables protein kinase binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    enables ubiquitin binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Component Evidence Code Pubs
    part_of SCF ubiquitin ligase complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    part_of cyclin-dependent protein kinase holoenzyme complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 

    General protein information

    Preferred Names
    cyclin-dependent kinases regulatory subunit 1
    Names
    CKS-1
    cyclin-dependent kinase regulatory subunit 1
    sid 1334

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_016904.1NP_058600.1  cyclin-dependent kinases regulatory subunit 1

      See identical proteins and their annotated locations for NP_058600.1

      Status: PROVISIONAL

      Source sequence(s)
      AB025409
      Consensus CDS
      CCDS38493.1
      UniProtKB/Swiss-Prot
      P61025
      Related
      ENSMUSP00000029679.4, ENSMUST00000029679.4
      Conserved Domains (1) summary
      pfam01111
      Location:873
      CKS; Cyclin-dependent kinase regulatory subunit

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000069.7 Reference GRCm39 C57BL/6J

      Range
      89322779..89325598 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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