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    Zranb2 zinc finger, RAN-binding domain containing 2 [ Mus musculus (house mouse) ]

    Gene ID: 53861, updated on 27-Jan-2018

    Summary

    Official Symbol
    Zranb2provided by MGI
    Official Full Name
    zinc finger, RAN-binding domain containing 2provided by MGI
    Primary source
    MGI:MGI:1858211
    See related
    Ensembl:ENSMUSG00000028180 Vega:OTTMUSG00000016669
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Zis; Zfp265; Znf265; AI227013
    Expression
    Broad expression in frontal lobe adult (RPKM 33.5), CNS E18 (RPKM 33.3) and 24 other tissues See more
    Orthologs

    Genomic context

    See Zranb2 in Genome Data Viewer
    Location:
    3; 3 H4
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 3 NC_000069.6 (157534151..157548341)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 3 NC_000069.5 (157197361..157211303)

    Chromosome 3 - NC_000069.6Genomic Context describing neighboring genes Neighboring gene ATP synthase, H+ transporting, mitochondrial F0 complex, subunit b, isoform 1 pseudogene Neighboring gene RIKEN cDNA 4930592C13 gene Neighboring gene microRNA 186 Neighboring gene prostaglandin E receptor 3 (subtype EP3) Neighboring gene predicted gene 5550

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    Related articles in PubMed

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (1) 

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    RNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    RNA splicing IEA
    Inferred from Electronic Annotation
    more info
     
    mRNA processing IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    nucleus IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    zinc finger Ran-binding domain-containing protein 2
    Names
    zinc finger protein 265
    zinc finger, splicing

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001355381.1NP_001342310.1  zinc finger Ran-binding domain-containing protein 2 isoform 3

      Status: VALIDATED

      Source sequence(s)
      AC141480, AK160862
    2. NM_001355386.1NP_001342315.1  zinc finger Ran-binding domain-containing protein 2 isoform 2

      Status: VALIDATED

      Source sequence(s)
      AC141480
      Conserved Domains (2) summary
      smart00547
      Location:6791
      ZnF_RBZ; Zinc finger domain
      sd00029
      Location:1334
      zf-RanBP2; RanBP2-type Zn finger [structural motif]
    3. NM_017381.3NP_059077.1  zinc finger Ran-binding domain-containing protein 2 isoform 1

      See identical proteins and their annotated locations for NP_059077.1

      Status: VALIDATED

      Source sequence(s)
      AK169335, BB804989, CJ045866
      Consensus CDS
      CCDS51100.1
      UniProtKB/Swiss-Prot
      Q9R020
      UniProtKB/TrEMBL
      B2RRT9
      Related
      ENSMUSP00000101673.2, OTTMUSP00000018026, ENSMUST00000106058.7
      Conserved Domains (2) summary
      smart00547
      Location:6791
      ZnF_RBZ; Zinc finger domain
      sd00029
      Location:1334
      zf-RanBP2; RanBP2-type Zn finger [structural motif]

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000069.6 Reference GRCm38.p4 C57BL/6J

      Range
      157534151..157548341
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017319646.1XP_017175135.1  zinc finger Ran-binding domain-containing protein 2 isoform X1

      UniProtKB/TrEMBL
      D3Z4U0
      Conserved Domains (2) summary
      smart00547
      Location:6791
      ZnF_RBZ; Zinc finger domain
      sd00029
      Location:1334
      zf-RanBP2; RanBP2-type Zn finger [structural motif]
    2. XM_017319647.1XP_017175136.1  zinc finger Ran-binding domain-containing protein 2 isoform X1

      UniProtKB/TrEMBL
      D3Z4U0
      Related
      ENSMUSP00000101672.2, OTTMUSP00000018027, ENSMUST00000106057.7, OTTMUST00000040345
      Conserved Domains (2) summary
      smart00547
      Location:6791
      ZnF_RBZ; Zinc finger domain
      sd00029
      Location:1334
      zf-RanBP2; RanBP2-type Zn finger [structural motif]
    3. XM_017319648.1XP_017175137.1  zinc finger Ran-binding domain-containing protein 2 isoform X2

      UniProtKB/Swiss-Prot
      Q9R020
      Related
      ENSMUSP00000029831.9, ENSMUST00000029831.15
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