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    Blcap bladder cancer associated protein [ Mus musculus (house mouse) ]

    Gene ID: 53619, updated on 31-Jan-2019

    Summary

    Official Symbol
    Blcapprovided by MGI
    Official Full Name
    bladder cancer associated proteinprovided by MGI
    Primary source
    MGI:MGI:1858907
    See related
    Ensembl:ENSMUSG00000067787
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Bc10; AI462828
    Expression
    Ubiquitous expression in whole brain E14.5 (RPKM 60.0), CNS E18 (RPKM 57.7) and 28 other tissues See more
    Orthologs

    Genomic context

    See Blcap in Genome Data Viewer
    Location:
    2 H1; 2 78.4 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 2 NC_000068.7 (157556362..157566460, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 2 NC_000068.6 (157382098..157392097, complement)

    Chromosome 2 - NC_000068.7Genomic Context describing neighboring genes Neighboring gene Rous sarcoma oncogene Neighboring gene 60S ribosomal protein L35a pseudogene Neighboring gene neuronatin Neighboring gene pluripotency associated transcript 27 Neighboring gene predicted gene, 34293

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Markers

    Homology

    Clone Names

    • MGC102074

    Gene Ontology Provided by MGI

    Process Evidence Code Pubs
    apoptotic nuclear changes ISO
    Inferred from Sequence Orthology
    more info
     
    apoptotic process IEA
    Inferred from Electronic Annotation
    more info
     
    cell cycle IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    bladder cancer-associated protein
    Names
    Blcapbladder cancer associated protein homolog
    bladder cancer 10 kDa protein
    bladder cancer associated protein homolog
    bladder cancer related protein

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001355426.1NP_001342355.1  bladder cancer-associated protein

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) represents the longer transcript. Variants 1 and 2 both encode the same protein.
      Source sequence(s)
      AL672259
      Conserved Domains (1) summary
      pfam06726
      Location:165
      BC10; Bladder cancer-related protein BC10
    2. NM_016916.3NP_058612.3  bladder cancer-associated protein

      See identical proteins and their annotated locations for NP_058612.3

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1 and 2 both encode the same protein.
      Source sequence(s)
      BC083339, BM950751, BY718283
      Consensus CDS
      CCDS16979.1
      UniProtKB/Swiss-Prot
      P62951
      Related
      ENSMUSP00000105154.2, ENSMUST00000109528.8
      Conserved Domains (1) summary
      pfam06726
      Location:165
      BC10; Bladder cancer-related protein BC10

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000068.7 Reference GRCm38.p4 C57BL/6J

      Range
      157556362..157566460 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006499900.2XP_006499963.1  bladder cancer-associated protein isoform X1

      UniProtKB/Swiss-Prot
      P62951
      Related
      ENSMUSP00000085849.2, ENSMUST00000088494.2
      Conserved Domains (1) summary
      pfam06726
      Location:165
      BC10; Bladder cancer-related protein BC10
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