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    Blcap bladder cancer associated protein [ Mus musculus (house mouse) ]

    Gene ID: 53619, updated on 23-Jun-2021

    Summary

    Official Symbol
    Blcapprovided by MGI
    Official Full Name
    bladder cancer associated proteinprovided by MGI
    Primary source
    MGI:MGI:1858907
    See related
    Ensembl:ENSMUSG00000067787
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Bc10; AI462828
    Expression
    Ubiquitous expression in whole brain E14.5 (RPKM 60.0), CNS E18 (RPKM 57.7) and 28 other tissues See more
    Orthologs
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    Genomic context

    See Blcap in Genome Data Viewer
    Location:
    2 H1; 2 78.4 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (157398282..157408281, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (157556362..157566361, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 2 NC_000068.6 (157382098..157392097, complement)

    Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene VISTA enhancer mm1673 Neighboring gene predicted gene 14279 Neighboring gene neuronatin Neighboring gene pluripotency associated transcript 27 Neighboring gene predicted gene, 34293

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Markers

    Homology

    Clone Names

    • MGC102074

    Gene Ontology Provided by MGI

    Process Evidence Code Pubs
    involved_in apoptotic nuclear changes ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within apoptotic process IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within cell cycle IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    bladder cancer-associated protein
    Names
    Blcapbladder cancer associated protein homolog
    bladder cancer 10 kDa protein
    bladder cancer associated protein homolog
    bladder cancer related protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001355426.1NP_001342355.1  bladder cancer-associated protein

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) represents the longer transcript. Variants 1 and 2 both encode the same protein.
      Source sequence(s)
      AL672259
      Consensus CDS
      CCDS16979.1
      Related
      ENSMUSP00000085849.3, ENSMUST00000088494.3
      Conserved Domains (1) summary
      pfam06726
      Location:165
      BC10; Bladder cancer-related protein BC10
    2. NM_016916.3NP_058612.3  bladder cancer-associated protein

      See identical proteins and their annotated locations for NP_058612.3

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1 and 2 both encode the same protein.
      Source sequence(s)
      BC083339, BM950751, BY718283
      Consensus CDS
      CCDS16979.1
      UniProtKB/Swiss-Prot
      P62951
      Related
      ENSMUSP00000105154.3, ENSMUST00000109528.9
      Conserved Domains (1) summary
      pfam06726
      Location:165
      BC10; Bladder cancer-related protein BC10

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000068.8 Reference GRCm39 C57BL/6J

      Range
      157398282..157408281 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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