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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001374745.1 → NP_001361674.1 heterogeneous nuclear ribonucleoproteins A2/B1 isoform 3
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) encodes the longest isoform (3).
- Source sequence(s)
-
AC154011
- Consensus CDS
-
CCDS90046.1
- UniProtKB/Swiss-Prot
- B9EJ02, O88569, Q3UVJ5, Q6PCV9, Q8C2A0, Q8CJ71, Q91ZR9, Q9R204
- UniProtKB/TrEMBL
-
B7ZP22
- Conserved Domains (3) summary
-
- pfam11627
Location:302 → 326
- HnRNPA1; Nuclear factor hnRNPA1
- cd12581
Location:112 → 191
- RRM2_hnRNPA2B1; RNA recognition motif 2 (RRM2) found in heterogeneous nuclear ribonucleoprotein A2/B1 (hnRNP A2/B1) and similar proteins
- cd12762
Location:19 → 99
- RRM1_hnRNPA2B1; RNA recognition motif 1 (RRM1) found in heterogeneous nuclear ribonucleoprotein A2/B1 (hnRNP A2/B1) and similar proteins
-
NM_016806.3 → NP_058086.2 heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1
See identical proteins and their annotated locations for NP_058086.2
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) encodes the longer isoform (1).
- Source sequence(s)
-
AK035626, AK137214, BB627924, BC141253, CN665325
- Consensus CDS
-
CCDS51774.1
- UniProtKB/TrEMBL
-
B7ZP22
- Conserved Domains (3) summary
-
- pfam11627
Location:290 → 314
- HnRNPA1; Nuclear factor hnRNPA1
- cd12581
Location:100 → 179
- RRM2_hnRNPA2B1; RNA recognition motif 2 (RRM2) found in heterogeneous nuclear ribonucleoprotein A2/B1 (hnRNP A2/B1) and similar proteins
- cd12762
Location:7 → 87
- RRM1_hnRNPA2B1; RNA recognition motif 1 (RRM1) found in heterogeneous nuclear ribonucleoprotein A2/B1 (hnRNP A2/B1) and similar proteins
-
NM_182650.4 → NP_872591.1 heterogeneous nuclear ribonucleoproteins A2/B1 isoform 2
See identical proteins and their annotated locations for NP_872591.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) lacks an alternate in-frame exon in the 3' coding region, compared to variant 1. It encodes isoform 2, which lacks an internal segment and is shorter, compared to isoform 1.
- Source sequence(s)
-
AK035626, AK137214, BC141253
- Consensus CDS
-
CCDS51773.1
- UniProtKB/TrEMBL
-
B7ZP22
- Related
- ENSMUSP00000067491.7, ENSMUST00000069949.13
- Conserved Domains (3) summary
-
- pfam11627
Location:247 → 274
- HnRNPA1; Nuclear factor hnRNPA1
- cd12581
Location:100 → 179
- RRM2_hnRNPA2B1; RNA recognition motif 2 (RRM2) found in heterogeneous nuclear ribonucleoprotein A2/B1 (hnRNP A2/B1) and similar proteins
- cd12762
Location:7 → 87
- RRM1_hnRNPA2B1; RNA recognition motif 1 (RRM1) found in heterogeneous nuclear ribonucleoprotein A2/B1 (hnRNP A2/B1) and similar proteins
RNA
-
NR_104468.1 RNA Sequence
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) contains an alternate exon in the 3' region, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AK035626, AK137214, BB627924, BC141253
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000072.7 Reference GRCm39 C57BL/6J
- Range
-
51437414..51448054 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_036166280.1 → XP_036022173.1 heterogeneous nuclear ribonucleoproteins A2/B1 isoform X4
- UniProtKB/TrEMBL
-
B7ZP22
- Related
- ENSMUSP00000145383.2, ENSMUST00000204158.3
- Conserved Domains (3) summary
-
- pfam11627
Location:247 → 274
- HnRNPA1; Nuclear factor hnRNPA1
- cd12581
Location:100 → 179
- RRM2_hnRNPA2B1; RNA recognition motif 2 (RRM2) found in heterogeneous nuclear ribonucleoprotein A2/B1 (hnRNP A2/B1) and similar proteins
- cd12762
Location:7 → 87
- RRM1_hnRNPA2B1; RNA recognition motif 1 (RRM1) found in heterogeneous nuclear ribonucleoprotein A2/B1 (hnRNP A2/B1) and similar proteins
-
XM_030255496.2 → XP_030111356.1 heterogeneous nuclear ribonucleoproteins A2/B1 isoform X2
- UniProtKB/TrEMBL
-
B7ZP22
- Related
- ENSMUSP00000087453.8, ENSMUST00000090002.10
- Conserved Domains (3) summary
-
- pfam11627
Location:290 → 314
- HnRNPA1; Nuclear factor hnRNPA1
- cd12581
Location:100 → 179
- RRM2_hnRNPA2B1; RNA recognition motif 2 (RRM2) found in heterogeneous nuclear ribonucleoprotein A2/B1 (hnRNP A2/B1) and similar proteins
- cd12762
Location:7 → 87
- RRM1_hnRNPA2B1; RNA recognition motif 1 (RRM1) found in heterogeneous nuclear ribonucleoprotein A2/B1 (hnRNP A2/B1) and similar proteins
-
XM_006506373.5 → XP_006506436.2 heterogeneous nuclear ribonucleoproteins A2/B1 isoform X1
See identical proteins and their annotated locations for XP_006506436.2
- UniProtKB/Swiss-Prot
- B9EJ02, O88569, Q3UVJ5, Q6PCV9, Q8C2A0, Q8CJ71, Q91ZR9, Q9R204
- UniProtKB/TrEMBL
-
B7ZP22
- Related
- ENSMUSP00000145028.2, ENSMUST00000203954.3
- Conserved Domains (3) summary
-
- pfam11627
Location:302 → 326
- HnRNPA1; Nuclear factor hnRNPA1
- cd12581
Location:112 → 191
- RRM2_hnRNPA2B1; RNA recognition motif 2 (RRM2) found in heterogeneous nuclear ribonucleoprotein A2/B1 (hnRNP A2/B1) and similar proteins
- cd12762
Location:19 → 99
- RRM1_hnRNPA2B1; RNA recognition motif 1 (RRM1) found in heterogeneous nuclear ribonucleoprotein A2/B1 (hnRNP A2/B1) and similar proteins
-
XM_030255499.2 → XP_030111359.1 heterogeneous nuclear ribonucleoproteins A2/B1 isoform X3
- UniProtKB/TrEMBL
-
B7ZP22
- Conserved Domains (3) summary
-
- cd12581
Location:112 → 191
- RRM2_hnRNPA2B1; RNA recognition motif 2 in heterogeneous nuclear ribonucleoprotein A2/B1 (hnRNP A2/B1) and similar proteins
- cd12762
Location:19 → 99
- RRM1_hnRNPA2B1; RNA recognition motif 1 in heterogeneous nuclear ribonucleoprotein A2/B1 (hnRNP A2/B1) and similar proteins
- pfam11627
Location:259 → 283
- HnRNPA1; Nuclear factor hnRNPA1
-
XM_030255500.2 → XP_030111360.1 heterogeneous nuclear ribonucleoproteins A2/B1 isoform X4
- UniProtKB/TrEMBL
-
B7ZP22
- Related
- ENSMUSP00000145245.2, ENSMUST00000204188.3
- Conserved Domains (3) summary
-
- pfam11627
Location:247 → 274
- HnRNPA1; Nuclear factor hnRNPA1
- cd12581
Location:100 → 179
- RRM2_hnRNPA2B1; RNA recognition motif 2 (RRM2) found in heterogeneous nuclear ribonucleoprotein A2/B1 (hnRNP A2/B1) and similar proteins
- cd12762
Location:7 → 87
- RRM1_hnRNPA2B1; RNA recognition motif 1 (RRM1) found in heterogeneous nuclear ribonucleoprotein A2/B1 (hnRNP A2/B1) and similar proteins
-
XM_036166279.1 → XP_036022172.1 heterogeneous nuclear ribonucleoproteins A2/B1 isoform X2
- UniProtKB/TrEMBL
-
B7ZP22
- Related
- ENSMUSP00000145374.2, ENSMUST00000203220.3
- Conserved Domains (3) summary
-
- pfam11627
Location:290 → 314
- HnRNPA1; Nuclear factor hnRNPA1
- cd12581
Location:100 → 179
- RRM2_hnRNPA2B1; RNA recognition motif 2 (RRM2) found in heterogeneous nuclear ribonucleoprotein A2/B1 (hnRNP A2/B1) and similar proteins
- cd12762
Location:7 → 87
- RRM1_hnRNPA2B1; RNA recognition motif 1 (RRM1) found in heterogeneous nuclear ribonucleoprotein A2/B1 (hnRNP A2/B1) and similar proteins
-
XM_036166278.1 → XP_036022171.1 heterogeneous nuclear ribonucleoproteins A2/B1 isoform X1
- UniProtKB/Swiss-Prot
- B9EJ02, O88569, Q3UVJ5, Q6PCV9, Q8C2A0, Q8CJ71, Q91ZR9, Q9R204
- UniProtKB/TrEMBL
-
B7ZP22
- Related
- ENSMUSP00000110103.3, ENSMUST00000114459.8
- Conserved Domains (3) summary
-
- pfam11627
Location:302 → 326
- HnRNPA1; Nuclear factor hnRNPA1
- cd12581
Location:112 → 191
- RRM2_hnRNPA2B1; RNA recognition motif 2 (RRM2) found in heterogeneous nuclear ribonucleoprotein A2/B1 (hnRNP A2/B1) and similar proteins
- cd12762
Location:19 → 99
- RRM1_hnRNPA2B1; RNA recognition motif 1 (RRM1) found in heterogeneous nuclear ribonucleoprotein A2/B1 (hnRNP A2/B1) and similar proteins
-
XM_030255497.2 → XP_030111357.1 heterogeneous nuclear ribonucleoproteins A2/B1 isoform X3
- UniProtKB/TrEMBL
-
B7ZP22
- Conserved Domains (3) summary
-
- cd12581
Location:112 → 191
- RRM2_hnRNPA2B1; RNA recognition motif 2 in heterogeneous nuclear ribonucleoprotein A2/B1 (hnRNP A2/B1) and similar proteins
- cd12762
Location:19 → 99
- RRM1_hnRNPA2B1; RNA recognition motif 1 in heterogeneous nuclear ribonucleoprotein A2/B1 (hnRNP A2/B1) and similar proteins
- pfam11627
Location:259 → 283
- HnRNPA1; Nuclear factor hnRNPA1
-
XM_030255498.2 → XP_030111358.1 heterogeneous nuclear ribonucleoproteins A2/B1 isoform X3
- UniProtKB/TrEMBL
-
B7ZP22
- Conserved Domains (3) summary
-
- cd12581
Location:112 → 191
- RRM2_hnRNPA2B1; RNA recognition motif 2 in heterogeneous nuclear ribonucleoprotein A2/B1 (hnRNP A2/B1) and similar proteins
- cd12762
Location:19 → 99
- RRM1_hnRNPA2B1; RNA recognition motif 1 in heterogeneous nuclear ribonucleoprotein A2/B1 (hnRNP A2/B1) and similar proteins
- pfam11627
Location:259 → 283
- HnRNPA1; Nuclear factor hnRNPA1
RNA
-
XR_377482.5 RNA Sequence
-
XR_003956232.2 RNA Sequence
-
XR_003956229.2 RNA Sequence
-
XR_003956228.1 RNA Sequence
-
XR_377483.5 RNA Sequence
-
XR_003956231.2 RNA Sequence
-
XR_003956230.2 RNA Sequence
-
XR_004942983.1 RNA Sequence
-
XR_868868.3 RNA Sequence
-
XR_004942981.1 RNA Sequence
-
XR_868866.3 RNA Sequence
-
XR_868865.3 RNA Sequence
-
XR_868864.3 RNA Sequence
-
XR_004942982.1 RNA Sequence