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    Anapc16 anaphase promoting complex subunit 16 [ Mus musculus (house mouse) ]

    Gene ID: 52717, updated on 23-Jun-2021

    Summary

    Official Symbol
    Anapc16provided by MGI
    Official Full Name
    anaphase promoting complex subunit 16provided by MGI
    Primary source
    MGI:MGI:1289325
    See related
    Ensembl:ENSMUSG00000020107
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    APC16; D10Ertd641; D10Ertd641e; 2310005G07Rik
    Expression
    Ubiquitous expression in bladder adult (RPKM 22.8), limb E14.5 (RPKM 21.2) and 28 other tissues See more
    Orthologs
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    Genomic context

    See Anapc16 in Genome Data Viewer
    Location:
    10 B4; 10 29.66 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 10 NC_000076.7 (59823231..59838957, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 10 NC_000076.6 (59987409..60003135, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 10 NC_000076.5 (59450657..59465860, complement)

    Chromosome 10 - NC_000076.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 40673 Neighboring gene DNA-damage-inducible transcript 4 Neighboring gene activating signal cointegrator 1 complex subunit 1 Neighboring gene predicted gene, 51801 Neighboring gene sparc/osteonectin, cwcv and kazal-like domains proteoglycan 2 Neighboring gene microRNA 6906

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    acts_upstream_of_or_within cell cycle IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within cell division IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in protein ubiquitination IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    involved_in protein ubiquitination ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    part_of anaphase-promoting complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    part_of anaphase-promoting complex ISO
    Inferred from Sequence Orthology
    more info
     
    located_in chromosome IEA
    Inferred from Electronic Annotation
    more info
     
    located_in chromosome, centromeric region IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in cytosol IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    located_in cytosol ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in kinetochore IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    located_in kinetochore ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    anaphase-promoting complex subunit 16
    Names
    cyclosome subunit 16

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001347451.1NP_001334380.1  anaphase-promoting complex subunit 16 isoform 2

      Status: VALIDATED

      Source sequence(s)
      AC154040, AK009172, BE623556, BE692118, CN707329
      Consensus CDS
      CCDS83700.1
      UniProtKB/Swiss-Prot
      Q9CPV2
      UniProtKB/TrEMBL
      S4R2B6
      Related
      ENSMUSP00000020307.5, ENSMUST00000020307.11
      Conserved Domains (1) summary
      pfam17256
      Location:46125
      ANAPC16; Anaphase Promoting Complex Subunit 16
    2. NM_025514.3NP_079790.1  anaphase-promoting complex subunit 16 isoform 1

      See identical proteins and their annotated locations for NP_079790.1

      Status: VALIDATED

      Source sequence(s)
      AC154040, AK009172, BE623556, BE692118
      Consensus CDS
      CCDS23869.1
      UniProtKB/Swiss-Prot
      Q9CPV2
      Related
      ENSMUSP00000138112.2, ENSMUST00000182898.8
      Conserved Domains (1) summary
      pfam17256
      Location:27106
      ANAPC16; Anaphase Promoting Complex Subunit 16

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000076.7 Reference GRCm39 C57BL/6J

      Range
      59823231..59838957 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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