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    Cdkn2aipnl CDKN2A interacting protein N-terminal like [ Mus musculus (house mouse) ]

    Gene ID: 52626, updated on 31-Jan-2019

    Summary

    Official Symbol
    Cdkn2aipnlprovided by MGI
    Official Full Name
    CDKN2A interacting protein N-terminal likeprovided by MGI
    Primary source
    MGI:MGI:1261797
    See related
    Ensembl:ENSMUSG00000020392
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    AA409260; MNCb-1520; D11Ertd497e; A430101B06Rik
    Expression
    Ubiquitous expression in thymus adult (RPKM 29.4), CNS E11.5 (RPKM 18.2) and 28 other tissues See more
    Orthologs

    Genomic context

    See Cdkn2aipnl in Genome Data Viewer
    Location:
    11 B1.3; 11 31.78 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 11 NC_000077.6 (51967631..51977336)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 11 NC_000077.5 (51781133..51790838)

    Chromosome 11 - NC_000077.6Genomic Context describing neighboring genes Neighboring gene predicted gene, 46281 Neighboring gene predicted gene, 39822 Neighboring gene ubiquitin-conjugating enzyme E2B Neighboring gene cyclin-dependent kinase-like 3 Neighboring gene protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform Neighboring gene predicted gene, 30631

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (2) 

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    molecular_function ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    nucleolus IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    nucleoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 

    General protein information

    Preferred Names
    CDKN2AIP N-terminal-like protein
    Names
    CDKN2A-interacting protein N-terminal-like protein

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_029976.3NP_084252.1  CDKN2AIP N-terminal-like protein

      See identical proteins and their annotated locations for NP_084252.1

      Status: VALIDATED

      Source sequence(s)
      AK150573, BQ032176, BY088687
      Consensus CDS
      CCDS24663.1
      UniProtKB/Swiss-Prot
      Q9D211
      Related
      ENSMUSP00000099824.4, ENSMUST00000102763.4
      Conserved Domains (1) summary
      pfam11952
      Location:25113
      XTBD; XRN-Two Binding Domain, XTBD

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000077.6 Reference GRCm38.p4 C57BL/6J

      Range
      51967631..51977336
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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