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    Ccdc69 coiled-coil domain containing 69 [ Mus musculus (house mouse) ]

    Gene ID: 52570, updated on 31-Jan-2019

    Summary

    Official Symbol
    Ccdc69provided by MGI
    Official Full Name
    coiled-coil domain containing 69provided by MGI
    Primary source
    MGI:MGI:1196234
    See related
    Ensembl:ENSMUSG00000049588
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    D11Ertd461e; 2210021E03Rik
    Expression
    Broad expression in bladder adult (RPKM 8.4), thymus adult (RPKM 3.9) and 16 other tissues See more
    Orthologs

    Genomic context

    See Ccdc69 in Genome Data Viewer
    Location:
    11 B1.3; 11 32.13 cM
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 11 NC_000077.6 (55049733..55078645, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 11 NC_000077.5 (54863240..54891633, complement)

    Chromosome 11 - NC_000077.6Genomic Context describing neighboring genes Neighboring gene TNFAIP3 interacting protein 1 Neighboring gene 40S ribosomal protein S11-like Neighboring gene annexin A6 Neighboring gene uncharacterized LOC102633930 Neighboring gene GM2 ganglioside activator protein Neighboring gene ATP synthase, H+ transporting, mitochondrial F0 complex, subunit b, isoform 1 pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (2) 

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    microtubule binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Process Evidence Code Pubs
    biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    colocalizes_with cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
     
    colocalizes_with microtubule cytoskeleton IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 

    General protein information

    Preferred Names
    coiled-coil domain-containing protein 69

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_177471.4NP_803422.2  coiled-coil domain-containing protein 69

      See identical proteins and their annotated locations for NP_803422.2

      Status: VALIDATED

      Source sequence(s)
      AK008760, AK079810
      Consensus CDS
      CCDS36155.1
      UniProtKB/Swiss-Prot
      Q3TCJ8
      UniProtKB/TrEMBL
      Q8CF00
      Related
      ENSMUSP00000054840.6, ENSMUST00000055040.12

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000077.6 Reference GRCm38.p4 C57BL/6J

      Range
      55049733..55078645 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011249125.1XP_011247427.1  coiled-coil domain-containing protein 69 isoform X1

      See identical proteins and their annotated locations for XP_011247427.1

      UniProtKB/Swiss-Prot
      Q3TCJ8
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