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    Jpt2 Jupiter microtubule associated homolog 2 [ Mus musculus (house mouse) ]

    Gene ID: 52009, updated on 4-Nov-2024

    Summary

    Official Symbol
    Jpt2provided by MGI
    Official Full Name
    Jupiter microtubule associated homolog 2provided by MGI
    Primary source
    MGI:MGI:1196260
    See related
    Ensembl:ENSMUSG00000024165 AllianceGenome:MGI:1196260
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Hn1l; C16orf34; D17Ertd441e; 2810430B18Rik
    Summary
    Predicted to be involved in endocytosis involved in viral entry into host cell and regulation of calcium-mediated signaling. Predicted to be located in cytosol and plasma membrane. Predicted to be active in nucleus. Is expressed in several structures, including central nervous system and neural retina. Orthologous to human JPT2 (Jupiter microtubule associated homolog 2). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Broad expression in CNS E11.5 (RPKM 42.7), placenta adult (RPKM 42.0) and 22 other tissues See more
    Orthologs
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    Genomic context

    See Jpt2 in Genome Data Viewer
    Location:
    17 A3.3; 17 12.53 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 17 NC_000083.7 (25161444..25179597, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 17 NC_000083.6 (24942470..24960623, complement)

    Chromosome 17 - NC_000083.7Genomic Context describing neighboring genes Neighboring gene mitogen-activated protein kinase 8 interacting protein 3 Neighboring gene mitochondrial ribosomal protein S34 Neighboring gene NME/NM23 nucleoside diphosphate kinase 3 Neighboring gene STARR-positive B cell enhancer ABC_E7499 Neighboring gene STARR-positive B cell enhancer ABC_E1500 Neighboring gene cramped chromatin regulator 1 Neighboring gene STARR-positive B cell enhancer ABC_E396 Neighboring gene intraflagellar transport 140 Neighboring gene STARR-positive B cell enhancer ABC_E11631 Neighboring gene transmembrane protein 204

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (2) 

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Component Evidence Code Pubs
    located_in cytoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cytoplasm ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cytosol ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in nucleus ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleus ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    jupiter microtubule associated homolog 2
    Names
    HN1-like protein
    hematological and neurological expressed 1-like protein
    hematopoietic- and neurologic-expressed sequence 1-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_198937.2NP_945175.1  jupiter microtubule associated homolog 2

      See identical proteins and their annotated locations for NP_945175.1

      Status: PROVISIONAL

      Source sequence(s)
      AC154229
      Consensus CDS
      CCDS28504.1
      UniProtKB/Swiss-Prot
      Q6PGH2
      UniProtKB/TrEMBL
      Q3TM10, Q3U7P4
      Related
      ENSMUSP00000024981.8, ENSMUST00000024981.9
      Conserved Domains (1) summary
      pfam17054
      Location:10104
      JUPITER; Microtubule-Associated protein Jupiter

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000083.7 Reference GRCm39 C57BL/6J

      Range
      25161444..25179597 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)