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    Rnf24 ring finger protein 24 [ Mus musculus (house mouse) ]

    Gene ID: 51902, updated on 31-Jan-2019

    Summary

    Official Symbol
    Rnf24provided by MGI
    Official Full Name
    ring finger protein 24provided by MGI
    Primary source
    MGI:MGI:1261771
    See related
    Ensembl:ENSMUSG00000048911
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    C86507; AI317164; D2Ertd504e; 2810473M14Rik; 4930505A13Rik
    Expression
    Broad expression in testis adult (RPKM 10.0), whole brain E14.5 (RPKM 9.9) and 25 other tissues See more
    Orthologs

    Genomic context

    See Rnf24 in Genome Data Viewer
    Location:
    2 F1; 2 63.32 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 2 NC_000068.7 (131298488..131352892, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 2 NC_000068.6 (131124224..131178628, complement)

    Chromosome 2 - NC_000068.7Genomic Context describing neighboring genes Neighboring gene mitochondrial antiviral signaling protein Neighboring gene pantothenate kinase 2 Neighboring gene microRNA 103-2 Neighboring gene small nuclear ribonucleoprotein E, pseudogene Neighboring gene predicted gene, 30590 Neighboring gene predicted gene, 46765 Neighboring gene predicted gene 14304

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    Related articles in PubMed

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    ubiquitin protein ligase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    Golgi apparatus IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Golgi apparatus ISO
    Inferred from Sequence Orthology
    more info
     
    endomembrane system IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    membrane IEA
    Inferred from Electronic Annotation
    more info
     

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_178607.4NP_848722.1  RING finger protein 24

      See identical proteins and their annotated locations for NP_848722.1

      Status: VALIDATED

      Source sequence(s)
      AK048813, BC096529, BQ895503
      Consensus CDS
      CCDS16762.1
      UniProtKB/Swiss-Prot
      Q8BGI1
      UniProtKB/TrEMBL
      Q4VA59
      Related
      ENSMUSP00000058630.4, ENSMUST00000059372.10
      Conserved Domains (1) summary
      cd16469
      Location:76122
      RING-H2_RNF24_like; RING finger, H2 subclass, found in RING finger proteins RNF24, RNF122, and similar proteins

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000068.7 Reference GRCm38.p4 C57BL/6J

      Range
      131298488..131352892 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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