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    Fbxo15 F-box protein 15 [ Mus musculus (house mouse) ]

    Gene ID: 50764, updated on 3-Feb-2019

    Summary

    Official Symbol
    Fbxo15provided by MGI
    Official Full Name
    F-box protein 15provided by MGI
    Primary source
    MGI:MGI:1354755
    See related
    Ensembl:ENSMUSG00000034391
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Fbx15; ecat3; AU019763
    Expression
    Biased expression in testis adult (RPKM 1.7) and placenta adult (RPKM 0.2) See more
    Orthologs

    Genomic context

    See Fbxo15 in Genome Data Viewer
    Location:
    18; 18 E4
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 18 NC_000084.6 (84934552..84981476)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 18 NC_000084.5 (85104417..85150784)

    Chromosome 18 - NC_000084.6Genomic Context describing neighboring genes Neighboring gene predicted gene, 17266 Neighboring gene predicted gene 16146 Neighboring gene cytochrome b5 type A (microsomal) Neighboring gene translocase of inner mitochondrial membrane 21 Neighboring gene predicted gene, 32291 Neighboring gene predicted gene 7612

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Pathways from BioSystems

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    contributes_to ubiquitin protein ligase activity IC
    Inferred by Curator
    more info
    PubMed 
    Component Evidence Code Pubs
    SCF ubiquitin ligase complex IDA
    Inferred from Direct Assay
    more info
    PubMed 

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001367965.1NP_001354894.1  F-box only protein 15 isoform 2

      Status: VALIDATED

      Source sequence(s)
      AC128672, AC134545
    2. NM_015798.4NP_056613.1  F-box only protein 15 isoform 1

      See identical proteins and their annotated locations for NP_056613.1

      Status: VALIDATED

      Source sequence(s)
      AK082809, BU757379
      Consensus CDS
      CCDS37877.1
      UniProtKB/TrEMBL
      Q3TJW2
      Related
      ENSMUSP00000045925.9, ENSMUST00000037718.9
      Conserved Domains (1) summary
      pfam12937
      Location:4387
      F-box-like; F-box-like

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000084.6 Reference GRCm38.p4 C57BL/6J

      Range
      84934552..84981476
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011247086.1XP_011245388.1  F-box only protein 15 isoform X2

      See identical proteins and their annotated locations for XP_011245388.1

      UniProtKB/TrEMBL
      Q3TJW2
      Conserved Domains (1) summary
      pfam12937
      Location:4387
      F-box-like; F-box-like
    2. XM_006526505.3XP_006526568.1  F-box only protein 15 isoform X1

      Conserved Domains (1) summary
      pfam12937
      Location:77121
      F-box-like; F-box-like

    RNA

    1. XR_877588.2 RNA Sequence

      Related
      ENSMUST00000225445.1
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