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    SEMA3B semaphorin 3B [ Canis lupus familiaris (dog) ]

    Gene ID: 484762, updated on 26-Sep-2018

    Summary

    Official Symbol
    SEMA3Bprovided by VGNC
    Official Full Name
    semaphorin 3Bprovided by VGNC
    Primary source
    VGNC:VGNC:45988
    See related
    Ensembl:ENSCAFG00000010719
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs

    Genomic context

    See SEMA3B in Genome Data Viewer
    Location:
    chromosome: 20
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    105 current CanFam3.1 (GCF_000002285.3) 20 NC_006602.3 (39058708..39067277, complement)

    Chromosome 20 - NC_006602.3Genomic Context describing neighboring genes Neighboring gene hyaluronidase 3 Neighboring gene N(alpha)-acetyltransferase 80, NatH catalytic subunit Neighboring gene interferon related developmental regulator 2 Neighboring gene leucine rich single-pass membrane protein 2 Neighboring gene G protein subunit alpha i2 Neighboring gene solute carrier family 38 member 3

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_006602.3 Chromosome 20 Reference CanFam3.1 Primary Assembly

    Pathways from BioSystems

    • Axon guidance, organism-specific biosystem (from KEGG)
      Axon guidance, organism-specific biosystemAxon guidance represents a key stage in the formation of neuronal network. Axons are guided by a variety of guidance factors, such as netrins, ephrins, Slits, and semaphorins. These guidance cues are...
    • Axon guidance, conserved biosystem (from KEGG)
      Axon guidance, conserved biosystemAxon guidance represents a key stage in the formation of neuronal network. Axons are guided by a variety of guidance factors, such as netrins, ephrins, Slits, and semaphorins. These guidance cues are...

    General gene information

    Homology

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 105 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference CanFam3.1 Primary Assembly

    Genomic

    1. NC_006602.3 Reference CanFam3.1 Primary Assembly

      Range
      39058708..39067277 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_022406705.1XP_022262413.1  semaphorin-3B isoform X1

      Related
      ENSCAFP00000040996.1, ENSCAFT00000046833.2
      Conserved Domains (3) summary
      smart00423
      Location:515551
      PSI; domain found in Plexins, Semaphorins and Integrins
      cl11960
      Location:575640
      Ig; Immunoglobulin domain
      cl15693
      Location:47516
      Sema; The Sema domain, a protein interacting module, of semaphorins and plexins
    2. XM_022406706.1XP_022262414.1  semaphorin-3B isoform X1

      Conserved Domains (3) summary
      smart00423
      Location:515551
      PSI; domain found in Plexins, Semaphorins and Integrins
      cl11960
      Location:575640
      Ig; Immunoglobulin domain
      cl15693
      Location:47516
      Sema; The Sema domain, a protein interacting module, of semaphorins and plexins
    3. XM_022406707.1XP_022262415.1  semaphorin-3B isoform X2

      Conserved Domains (3) summary
      smart00423
      Location:322358
      PSI; domain found in Plexins, Semaphorins and Integrins
      cl11960
      Location:382447
      Ig; Immunoglobulin domain
      cl15693
      Location:1323
      Sema; The Sema domain, a protein interacting module, of semaphorins and plexins
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