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    BG642163 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 4379888, updated on 29-Dec-2023

    Summary

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    Official Symbol
    BG642163provided by FlyBase
    Primary source
    FLYBASE:FBgn0083938
    Locus tag
    Dmel_CG34102
    See related
    AllianceGenome:FB:FBgn0083938
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BG642163(1a3); CG34102; Dmel\CG34102
    Summary
    Involved in multicellular organism reproduction. Located in extracellular space. Is expressed in adult head. [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    Location:
    25A2-25A2; 2-13 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (4641296..4642872)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (4641296..4642872)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR44609 Neighboring gene long non-coding RNA:CR45452 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Quantitative Proteomics Identification of Seminal Fluid Proteins in Male Drosophila melanogaster. Sepil I, et al. Mol Cell Proteomics, 2019 Mar 15. PMID 30287546, Free PMC Article
    2. Ecdysis triggering hormone receptors regulate male courtship behavior via antennal lobe interneurons in Drosophila. Deshpande SA, et al. Gen Comp Endocrinol, 2019 Jul 1. PMID 30543770
    3. Cross-species comparison of Drosophila male accessory gland protein genes. Mueller JL, et al. Genetics, 2005 Sep. PMID 15944345, Free PMC Article
    4. Proteomic discovery of previously unannotated, rapidly evolving seminal fluid genes in Drosophila. Findlay GD, et al. Genome Res, 2009 May. PMID 19411605, Free PMC Article
    5. Proteome mapping of the Drosophila melanogaster male reproductive system. Takemori N, et al. Proteomics, 2009 May. PMID 19343724

    See all (23) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in sexual reproduction HEP PubMed 
    Component Evidence Code Pubs
    located_in extracellular space HDA PubMed 
    located_in extracellular space ISM
    Inferred from Sequence Model
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    BG642163
    Names
    BG642163-PA
    BG642163-PB
    CG34102-PA
    CG34102-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      4641296..4642872
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001298675.1 → NP_001285604.1  BG642163, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001285604.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      B3DNJ1, Q3HKQ0
      Conserved Domains (1) summary
      PHA03247
      Location:118 → 415
      PHA03247; large tegument protein UL36; Provisional

    2. NM_001042866.2 → NP_001036331.1  BG642163, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001036331.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      B3DNJ1, Q3HKQ0
      Conserved Domains (1) summary
      PHA03247
      Location:118 → 415
      PHA03247; large tegument protein UL36; Provisional
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q3HKQ0 Q3HKQ0

    Gene LinkOut

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