U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    HSPBAP1 HSPB1 associated protein 1 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 43329, updated on 27-Mar-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    HSPBAP1provided by FlyBase
    Official Full Name
    HSPB1 associated protein 1provided by FlyBase
    Primary source
    FLYBASE:FBgn0263025
    Locus tag
    Dmel_CG43320
    See related
    AllianceGenome:FB:FBgn0263025
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG12879; CG43320; Dmel\CG43320
    Summary
    Predicted to enable 2-oxoglutarate-dependent dioxygenase activity. Located in cytoplasm. Is expressed in spermatozoon. Orthologous to human HSPBAP1 (HSPB1 associated protein 1). [provided by Alliance of Genome Resources, Apr 2022]
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    98B1-98B1; 3-94 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (27695235..27696531)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (23520977..23522173)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Accessory gland protein 98AB Neighboring gene ALG-2 interacting protein X Neighboring gene barentsz Neighboring gene Carnitine O-octanoyltransferase Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. JmjC domain proteins modulate circadian behaviors and sleep in Drosophila. Shalaby NA, et al. Sci Rep, 2018 Jan 16. PMID 29339751, Free PMC Article
    2. Alcohol-Induced Behaviors Require a Subset of Drosophila JmjC-Domain Histone Demethylases in the Nervous System. Pinzón JH, et al. Alcohol Clin Exp Res, 2017 Dec. PMID 28940624, Free PMC Article
    3. Histone lysine demethylases in Drosophila melanogaster. Holowatyj A, et al. Fly (Austin), 2015. PMID 26207949, Free PMC Article
    4. JmjC-domain-containing proteins and histone demethylation. Klose RJ, et al. Nat Rev Genet, 2006 Sep. PMID 16983801
    5. Barentsz is essential for the posterior localization of oskar mRNA and colocalizes with it to the posterior pole. van Eeden FJ, et al. J Cell Biol, 2001 Aug 6. PMID 11481346, Free PMC Article

    See all (29) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables 2-oxoglutarate-dependent dioxygenase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    HSPB1 associated protein 1
    Names
    CG43320-PA
    HSPBAP1-PA
    NP_651581.2

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      27695235..27696531
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_143324.3 → NP_651581.2  HSPB1 associated protein 1 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_651581.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VB06
      Conserved Domains (1) summary
      cl21464
      Location:11 → 237
      cupin_like; Conserved domain found in cupin and related proteins
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VB06 Q9VB06

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Other Literature Sources
    Molecular Biology Databases
    Tools
    Miscellaneous