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    Ccp84Ac [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 40823, updated on 4-Apr-2024

    Summary

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    Official Symbol
    Ccp84Acprovided by FlyBase
    Primary source
    FLYBASE:FBgn0004781
    Locus tag
    Dmel_CG1327
    See related
    AllianceGenome:FB:FBgn0004781
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BG:DS00004.3; cc6; Ccp; CG1327; DmelCcp84Ac; Dmel\CG1327
    Summary
    Predicted to be a structural constituent of chitin-based larval cuticle. Predicted to be involved in chitin-based cuticle development. Predicted to be located in chitin-based extracellular matrix. Predicted to be active in extracellular matrix. [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    Location:
    84A3-84A4; 3-48 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (6695148..6696271, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (2520870..2521993, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene Ccp84Ae Neighboring gene Ccp84Ad Neighboring gene long non-coding RNA:CR33938 Neighboring gene Ccp84Ab

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Coordinated regulation of Myc trans-activation targets by Polycomb and the Trithorax group protein Ash1. Goodliffe JM, et al. BMC Mol Biol, 2007 May 22. PMID 17519021, Free PMC Article
    2. Conservation of regulatory sequences and gene expression patterns in the disintegrating Drosophila Hox gene complex. Negre B, et al. Genome Res, 2005 May. PMID 15867430, Free PMC Article
    3. Extensive gene amplification and concerted evolution within the CPR family of cuticular proteins in mosquitoes. Cornman RS, et al. Insect Biochem Mol Biol, 2008 Jun. PMID 18510978, Free PMC Article
    4. Molecular and genetic organization of the antennapedia gene complex of Drosophila melanogaster. Kaufman TC, et al. Adv Genet, 1990. PMID 1971986
    5. HOM-C evolution in Drosophila: is there a need for Hox gene clustering? Negre B, et al. Trends Genet, 2007 Feb. PMID 17188778

    See all (31) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables structural constituent of chitin-based larval cuticle ISM
    Inferred from Sequence Model
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in chitin-based cuticle development ISM
    Inferred from Sequence Model
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chitin-based extracellular matrix ISM
    Inferred from Sequence Model
    more info
    		 PubMed 
    is_active_in extracellular matrix IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    Ccp84Ac
    Names
    CG1327-PA
    Ccp84Ac-PA
    cuticle cluster 6
    larval cuticle

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      6695148..6696271 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_141424.3 → NP_649681.1  Ccp84Ac [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_649681.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      O97060
      Related
      FBpp0081191
      Conserved Domains (1) summary
      pfam00379
      Location:65 → 117
      Chitin_bind_4; Insect cuticle protein
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O97060 O97060

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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