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    SERTM1 serine rich and transmembrane domain containing 1 [ Homo sapiens (human) ]

    Gene ID: 400120, updated on 17-Jun-2024

    Summary

    Official Symbol
    SERTM1provided by HGNC
    Official Full Name
    serine rich and transmembrane domain containing 1provided by HGNC
    Primary source
    HGNC:HGNC:33792
    See related
    Ensembl:ENSG00000180440 AllianceGenome:HGNC:33792
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    C13orf36
    Summary
    Located in intracellular membrane-bounded organelle. [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Biased expression in brain (RPKM 12.4), endometrium (RPKM 5.9) and 4 other tissues See more
    Orthologs
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    Genomic context

    See SERTM1 in Genome Data Viewer
    Location:
    13q13.3
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 13 NC_000013.11 (36674020..36697839)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 13 NC_060937.1 (35893537..35917348)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 13 NC_000013.10 (37248157..37271976)

    Chromosome 13 - NC_000013.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124903155 Neighboring gene uncharacterized LOC124903157 Neighboring gene uncharacterized LOC102723490 Neighboring gene uncharacterized LOC124903156 Neighboring gene glyceraldehyde 3 phosphate dehydrogenase pseudogene 34

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General protein information

    Preferred Names
    serine-rich and transmembrane domain-containing protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_203451.3NP_982276.2  serine-rich and transmembrane domain-containing protein 1

      See identical proteins and their annotated locations for NP_982276.2

      Status: VALIDATED

      Source sequence(s)
      AL136160, BC036540, BI544475, CA392022, DC425828
      Consensus CDS
      CCDS9358.1
      UniProtKB/Swiss-Prot
      A2A2V5, Q8N469
      UniProtKB/TrEMBL
      B4DFS3
      Related
      ENSP00000325776.3, ENST00000315190.4
      Conserved Domains (1) summary
      pfam15872
      Location:11106
      SRTM1; Serine-rich and transmembrane domain-containing protein 1

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000013.11 Reference GRCh38.p14 Primary Assembly

      Range
      36674020..36697839
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060937.1 Alternate T2T-CHM13v2.0

      Range
      35893537..35917348
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)