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    ANGPTL4 angiopoietin like 4 [ Sus scrofa (pig) ]

    Gene ID: 397628, updated on 2-Oct-2018

    Summary

    Gene symbol
    ANGPTL4
    Gene description
    angiopoietin like 4
    See related
    Ensembl:ENSSSCG00000013599
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Sus scrofa
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Suina; Suidae; Sus
    Also known as
    PGAR
    Expression
    Broad expression in subcutaneous adipose (RPKM 219.4), liver (RPKM 58.2) and 8 other tissues See more
    Orthologs

    Genomic context

    See ANGPTL4 in Genome Data Viewer
    Location:
    2; 2q21-q24
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    106 current Sscrofa11.1 (GCF_000003025.6) 2 NC_010444.4 (70905767..70912892, complement)
    105 previous assembly Sscrofa10.2 (GCF_000003025.5) 2 NC_010444.3 (71272459..71279585, complement)

    Chromosome 2 - NC_010444.4Genomic Context describing neighboring genes Neighboring gene membrane associated ring-CH-type finger 2 Neighboring gene RAB11B, member RAS oncogene family Neighboring gene KN motif and ankyrin repeat domains 3 Neighboring gene NADH:ubiquinone oxidoreductase subunit A7 Neighboring gene ribosomal protein S28

    Genomic regions, transcripts, and products

    Expression

    • Project title: Transcriptome data used for gene annotation
    • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
    • BioProject: PRJNA311523
    • Publication: PMID 27646534
    • Analysis date: Thu Dec 14 17:10:49 2017

    Bibliography

    Related articles in PubMed

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Pathways from BioSystems

    • PPAR signaling pathway, organism-specific biosystem (from KEGG)
      PPAR signaling pathway, organism-specific biosystemPeroxisome proliferator-activated receptors (PPARs) are nuclear hormone receptors that are activated by fatty acids and their derivatives. PPAR has three subtypes (PPARalpha, beta/delta, and gamma) s...
    • PPAR signaling pathway, conserved biosystem (from KEGG)
      PPAR signaling pathway, conserved biosystemPeroxisome proliferator-activated receptors (PPARs) are nuclear hormone receptors that are activated by fatty acids and their derivatives. PPAR has three subtypes (PPARalpha, beta/delta, and gamma) s...

    General gene information

    Homology

    Gene Ontology Provided by GO

    Function Evidence Code Pubs
    enzyme inhibitor activity IEA
    Inferred from Electronic Annotation
    more info
     
    identical protein binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    angiogenesis IEA
    Inferred from Electronic Annotation
    more info
     
    cell differentiation IEA
    Inferred from Electronic Annotation
    more info
     
    negative regulation of endothelial cell apoptotic process IEA
    Inferred from Electronic Annotation
    more info
     
    negative regulation of lipoprotein lipase activity IEA
    Inferred from Electronic Annotation
    more info
     
    triglyceride homeostasis IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    extracellular space IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    angiopoietin-related protein 4
    Names
    PPARG angiopoietin-related protein
    angiopoietin-like protein 4

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001038644.1NP_001033733.1  angiopoietin-related protein 4 precursor

      See identical proteins and their annotated locations for NP_001033733.1

      Status: PROVISIONAL

      Source sequence(s)
      AY751522
      UniProtKB/Swiss-Prot
      Q2TNK5
      Related
      ENSSSCP00000014452.2, ENSSSCT00000014853.3
      Conserved Domains (2) summary
      cd00087
      Location:189405
      FReD; Fibrinogen-related domains (FReDs); C terminal globular domain of fibrinogen. Fibrinogen is involved in blood clotting, being activated by thrombin to assemble into fibrin clots. The N-termini of 2 times 3 chains come together to form a globular ...
      pfam08702
      Location:111134
      Fib_alpha; Fibrinogen alpha/beta chain family

    RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Sscrofa11.1 Primary Assembly

    Genomic

    1. NC_010444.4 Reference Sscrofa11.1 Primary Assembly

      Range
      70905767..70912892 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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