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    CG8100 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 39565, updated on 4-Apr-2024

    Summary

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    Official Symbol
    CG8100provided by FlyBase
    Primary source
    FLYBASE:FBgn0036410
    Locus tag
    Dmel_CG8100
    See related
    AllianceGenome:FB:FBgn0036410
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG8100; lincRNA.S5087
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    Genomic context

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    Location:
    70D2-70D2; 3-42 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (14083615..14086421)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (14076715..14079064)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene antisense RNA:CR46067 Neighboring gene Formin-like Neighboring gene Peroxin 1 Neighboring gene breathless Neighboring gene Fat body protein 1 Neighboring gene Sox21a

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Control of Cell Growth and Proliferation by the Tribbles Pseudokinase: Lessons from Drosophila. Dobens LL, et al. Cancers (Basel), 2021 Feb 20. PMID 33672471, Free PMC Article
    2. Chronic low-dose γ-irradiation of Drosophila melanogaster larvae induces gene expression changes and enhances locomotive behavior. Kim CS, et al. J Radiat Res, 2015 May. PMID 25792464, Free PMC Article
    3. Infection Dynamics and Immune Response in a Newly Described Drosophila-Trypanosomatid Association. Hamilton PT, et al. mBio, 2015 Sep 15. PMID 26374124, Free PMC Article
    4. Microgravity simulation by diamagnetic levitation: effects of a strong gradient magnetic field on the transcriptional profile of Drosophila melanogaster. Herranz R, et al. BMC Genomics, 2012 Feb 1. PMID 22296880, Free PMC Article
    5. Genome-wide gene expression in response to parasitoid attack in Drosophila. Wertheim B, et al. Genome Biol, 2005. PMID 16277749, Free PMC Article

    See all (26) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG8100-PA
    CG8100-PB
    CG8100-PC

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      14083615..14086421
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001316450.1 → NP_001303379.1  uncharacterized protein Dmel_CG8100, isoform C [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8MSN6, Q9VUC9
      Conserved Domains (2) summary
      pfam03722
      Location:41 → 163
      Hemocyanin_N; Hemocyanin, all-alpha domain
      pfam03723
      Location:444 → 621
      Hemocyanin_C; Hemocyanin, ig-like domain

    2. NM_001274896.1 → NP_001261825.1  uncharacterized protein Dmel_CG8100, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001261825.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8MSN6, Q9VUC9
      Conserved Domains (2) summary
      pfam03722
      Location:41 → 163
      Hemocyanin_N; Hemocyanin, all-alpha domain
      pfam03723
      Location:444 → 621
      Hemocyanin_C; Hemocyanin, ig-like domain

    3. NM_140436.3 → NP_648693.2  uncharacterized protein Dmel_CG8100, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_648693.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8MSN6, Q9VUC9
      Conserved Domains (2) summary
      pfam03722
      Location:41 → 163
      Hemocyanin_N; Hemocyanin, all-alpha domain
      pfam03723
      Location:444 → 621
      Hemocyanin_C; Hemocyanin, ig-like domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8MSN6 Q8MSN6
    Q9VUC9 Q9VUC9

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