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    LRRC10B leucine rich repeat containing 10B [ Homo sapiens (human) ]

    Gene ID: 390205, updated on 5-Mar-2024

    Summary

    Official Symbol
    LRRC10Bprovided by HGNC
    Official Full Name
    leucine rich repeat containing 10Bprovided by HGNC
    Primary source
    HGNC:HGNC:37215
    See related
    Ensembl:ENSG00000204950 AllianceGenome:HGNC:37215
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Orthologs
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    Genomic context

    See LRRC10B in Genome Data Viewer
    Location:
    11q12.2
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 11 NC_000011.10 (61508749..61511018)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 11 NC_060935.1 (61497629..61499898)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 11 NC_000011.9 (61276221..61278490)

    Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105369329 Neighboring gene MPRA-validated peak1286 silencer Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:61280313-61280926 Neighboring gene microRNA 4488 Neighboring gene synaptotagmin 7 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:61297435-61297934 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:61301414-61302353 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:61302354-61303292 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 3394 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 3395 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 3396 Neighboring gene uncharacterized LOC105369331 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:61354237-61354816 Neighboring gene uncharacterized LOC101927495 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:61355975-61356553 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr11:61366831-61367498 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:61368167-61368834

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General protein information

    Preferred Names
    leucine-rich repeat-containing protein 10B
    Names
    LRRC10-like protein ENSP00000367315

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001145077.2NP_001138549.1  leucine-rich repeat-containing protein 10B

      See identical proteins and their annotated locations for NP_001138549.1

      Status: VALIDATED

      Source sequence(s)
      AP003108, AW137416
      Consensus CDS
      CCDS44621.1
      UniProtKB/Swiss-Prot
      A6NIK2
      Related
      ENSP00000367315.2, ENST00000378075.4
      Conserved Domains (3) summary
      sd00033
      Location:2445
      LRR_RI; leucine-rich repeat [structural motif]
      pfam12799
      Location:90129
      LRR_4; Leucine Rich repeats (2 copies)
      pfam13855
      Location:90148
      LRR_8; Leucine rich repeat

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000011.10 Reference GRCh38.p14 Primary Assembly

      Range
      61508749..61511018
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060935.1 Alternate T2T-CHM13v2.0

      Range
      61497629..61499898
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)