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    Pramel34 PRAME like 34 [ Mus musculus (house mouse) ]

    Gene ID: 381654, updated on 8-Jul-2021

    Summary

    Official Symbol
    Pramel34provided by MGI
    Official Full Name
    PRAME like 34provided by MGI
    Primary source
    MGI:MGI:2141341
    See related
    Ensembl:ENSMUSG00000070686
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    C87414
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

    See Pramel34 in Genome Data Viewer
    Location:
    5; 5 E3
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (93783041..93819368, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (93635182..93671509, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 5 NC_000071.5 (94064211..94100489, complement)

    Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 18118 Neighboring gene PRAME like 33 Neighboring gene predicted gene 43225 Neighboring gene PRAME family member 9/15-like

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Markers

    Clone Names

    • MGC60750, MGC91124, MGC103218

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables ubiquitin ligase-substrate adaptor activity ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    part_of Cul2-RING ubiquitin ligase complex ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 

    General protein information

    Preferred Names
    uncharacterized protein LOC381654

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001164284.2NP_001157756.1  uncharacterized protein LOC381654

      See identical proteins and their annotated locations for NP_001157756.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) represents the longer transcript. Variants 1 and 2 encode the same protein.
      Source sequence(s)
      AC125052, AC134584
      Consensus CDS
      CCDS51552.1
      UniProtKB/TrEMBL
      E9PWI7
      Related
      ENSMUSP00000124780.2, ENSMUST00000162964.8

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000071.7 Reference GRCm39 C57BL/6J

      Range
      93783041..93819368 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006535030.2XP_006535093.1  uncharacterized protein LOC381654 isoform X1

      See identical proteins and their annotated locations for XP_006535093.1

      UniProtKB/TrEMBL
      E9PWI7

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001164285.1: Suppressed sequence

      Description
      NM_001164285.1: This RefSeq was removed because currently there is insufficient support for the transcript.
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