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    C87414 expressed sequence C87414 [ Mus musculus (house mouse) ]

    Gene ID: 381654, updated on 31-Jan-2019

    Summary

    Official Symbol
    C87414provided by MGI
    Official Full Name
    expressed sequence C87414provided by MGI
    Primary source
    MGI:MGI:2141341
    See related
    Ensembl:ENSMUSG00000070686
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Expression
    Low expression observed in reference dataset See more

    Genomic context

    See C87414 in Genome Data Viewer
    Location:
    5; 5 E2
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 5 NC_000071.6 (93635185..93671463, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 5 NC_000071.5 (94064211..94100489, complement)

    Chromosome 5 - NC_000071.6Genomic Context describing neighboring genes Neighboring gene predicted gene, 18118 Neighboring gene predicted gene 16427 Neighboring gene PRAME family member 9/15-like Neighboring gene predicted gene 7792

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    Related articles in PubMed

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    General gene information

    Markers

    Clone Names

    • MGC60750, MGC91124, MGC103218

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 

    General protein information

    Preferred Names
    uncharacterized protein LOC381654

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001164284.2NP_001157756.1  uncharacterized protein LOC381654

      See identical proteins and their annotated locations for NP_001157756.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) represents the longer transcript. Variants 1 and 2 encode the same protein.
      Source sequence(s)
      AC125052, AC134584
      Consensus CDS
      CCDS51552.1
      UniProtKB/TrEMBL
      E9PWI7

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000071.6 Reference GRCm38.p4 C57BL/6J

      Range
      93635185..93671463 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006535030.1XP_006535093.1  uncharacterized protein LOC381654 isoform X1

      See identical proteins and their annotated locations for XP_006535093.1

      UniProtKB/TrEMBL
      E9PWI7

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001164285.1: Suppressed sequence

      Description
      NM_001164285.1: This RefSeq was removed because currently there is insufficient support for the transcript.
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