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    Heca hdc homolog, cell cycle regulator [ Mus musculus (house mouse) ]

    Gene ID: 380629, updated on 23-Jun-2021

    Summary

    Official Symbol
    Hecaprovided by MGI
    Official Full Name
    hdc homolog, cell cycle regulatorprovided by MGI
    Primary source
    MGI:MGI:2685715
    See related
    Ensembl:ENSMUSG00000039879
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    HDC; HDCL; Gm869
    Expression
    Ubiquitous expression in bladder adult (RPKM 5.7), lung adult (RPKM 5.2) and 28 other tissues See more
    Orthologs
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    Genomic context

    See Heca in Genome Data Viewer
    Location:
    10; 10 A3
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 10 NC_000076.7 (17774788..17823815, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 10 NC_000076.6 (17899040..17948067, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 10 NC_000076.5 (17620272..17667873, complement)

    Chromosome 10 - NC_000076.7Genomic Context describing neighboring genes Neighboring gene predicted gene 20655 Neighboring gene taxilin beta Neighboring gene chromodomain protein, Y chromosome-like pseudogene Neighboring gene uncharacterized LOC118567827 Neighboring gene ABRA C-terminal like Neighboring gene RalBP1 associated Eps domain containing protein

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in negative regulation of mitotic cell cycle ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    located_in cytoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleus ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    headcase protein homolog
    Names
    headcase homolog

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001033432.3NP_001028604.1  headcase protein homolog

      See identical proteins and their annotated locations for NP_001028604.1

      Status: PROVISIONAL

      Source sequence(s)
      AC153896
      Consensus CDS
      CCDS23709.1
      UniProtKB/TrEMBL
      Q3V1N5
      Related
      ENSMUSP00000040707.7, ENSMUST00000037879.8
      Conserved Domains (2) summary
      pfam15353
      Location:94192
      HECA; Headcase protein family homologue
      pfam16002
      Location:344535
      Headcase; Headcase protein

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000076.7 Reference GRCm39 C57BL/6J

      Range
      17774788..17823815 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006512783.5XP_006512846.1  headcase protein homolog isoform X1

      Conserved Domains (2) summary
      pfam15353
      Location:40138
      HECA; Headcase protein family homolog
      pfam16002
      Location:286481
      Headcase; Headcase protein
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