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    sea scheggia [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 3772221, updated on 19-Aug-2018

    Summary

    Official Symbol
    seaprovided by FlyBase
    Official Full Name
    scheggiaprovided by FlyBase
    Primary source
    FLYBASE:FBgn0037912
    Locus tag
    Dmel_CG6782
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster (old-lineage: Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    anon-WO0140519.12; CG31305; CG6782; DmCIC; Dmel\CG6782; l(3)EP3364; Sea; SLC25A1

    Genomic context

    See sea in Genome Data Viewer
    Location:
    86E10-86E10; 3-51 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    Release 6.13 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (11559896..11567054, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (7385618..7392776, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene fatty acid binding protein Neighboring gene Multidrug resistance protein 4 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

    Pathways from BioSystems

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Homology

    Gene Ontology Provided by FlyBase

    Process Evidence Code Pubs
    citrate transport IDA
    Inferred from Direct Assay
    more info
    PubMed 
    mitochondrial citrate transmembrane transport IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    mitochondrial citrate transmembrane transport IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    Nebenkern IDA
    Inferred from Direct Assay
    more info
    PubMed 
    mitochondrion IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    scheggia
    Names
    CG6782-PA
    CG6782-PC
    CG6782-PD
    CG6782-PE
    sea-PA
    sea-PC
    sea-PD
    sea-PE

    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      11559896..11567054 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001032005.2NP_001027176.1  scheggia, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001027176.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7KSQ0
      Related
      FBpp0099890.1, FBtr0100464
      Conserved Domains (2) summary
      PTZ00168
      Location:34302
      PTZ00168; mitochondrial carrier protein; Provisional
      pfam00153
      Location:34117
      Mito_carr; Mitochondrial carrier protein
    2. NM_001032007.2NP_001027178.1  scheggia, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001027178.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7KSQ0
      Related
      FBpp0099888.1, FBtr0100461
      Conserved Domains (2) summary
      PTZ00168
      Location:34302
      PTZ00168; mitochondrial carrier protein; Provisional
      pfam00153
      Location:34117
      Mito_carr; Mitochondrial carrier protein
    3. NM_001032004.2NP_001027175.1  scheggia, isoform E [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001027175.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7KSQ0
      Related
      FBpp0099892.1, FBtr0100465
      Conserved Domains (2) summary
      PTZ00168
      Location:34302
      PTZ00168; mitochondrial carrier protein; Provisional
      pfam00153
      Location:34117
      Mito_carr; Mitochondrial carrier protein
    4. NM_001032006.2NP_001027177.1  scheggia, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001027177.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7KSQ0
      Related
      FBpp0099889.1, FBtr0100462
      Conserved Domains (2) summary
      PTZ00168
      Location:34302
      PTZ00168; mitochondrial carrier protein; Provisional
      pfam00153
      Location:34117
      Mito_carr; Mitochondrial carrier protein
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