U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    upd3 unpaired 3 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 3346149, updated on 5-Jan-2023

    Summary

    Official Symbol
    upd3provided by FlyBase
    Official Full Name
    unpaired 3provided by FlyBase
    Primary source
    FLYBASE:FBgn0053542
    Locus tag
    Dmel_CG33542
    See related
    AllianceGenome:FB:FBgn0053542
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    cg15062; CG15062; CG15062/CG5963; CG33542; cg5963; CG5963; Dmel\CG33542; od; odsy; os; sy; Unpaireds; upd; Upd; upd 3; upd-3; Upd-3; Upd-like; Upd3; UPD3
    Summary
    Enables cytokine activity. Involved in several processes, including intestinal epithelial structure maintenance; intestinal stem cell homeostasis; and paracrine signaling. Located in extracellular space. Is expressed in several structures, including embryonic/larval lymph gland; embryonic/larval optic stalk; eye disc posterior compartment; gut; and wing disc. [provided by Alliance of Genome Resources, Apr 2022]
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See upd3 in Genome Data Viewer
    Location:
    17A4-17A4; 1-60 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    Release 6.46 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (18277233..18284596)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (18171266..18178629)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR45613 Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR15061 Neighboring gene unpaired 1

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    General protein information

    Preferred Names
    unpaired 3
    Names
    CG33542-PB
    Unpaired3
    Upd3
    outstretched
    outstretched-smalleye
    small-eye
    unpaired
    unpaired 3beta
    unpaired-3
    unpaired-3.3
    unpaired-like protein 3
    upd homolog
    upd3-PB

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      18277233..18284596
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001103544.2NP_001097014.1  unpaired 3 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001097014.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q59E38
      Related
      FBpp0112376, FBtr0113465
      Conserved Domains (1) summary
      pfam15972
      Location:100393
      Unpaired; Unpaired protein