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    Cyb5d1 cytochrome b5 domain containing 1 [ Mus musculus (house mouse) ]

    Gene ID: 327951, updated on 31-Jan-2019

    Summary

    Official Symbol
    Cyb5d1provided by MGI
    Official Full Name
    cytochrome b5 domain containing 1provided by MGI
    Primary source
    MGI:MGI:2685586
    See related
    Ensembl:ENSMUSG00000044795
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Gm740
    Expression
    Ubiquitous expression in bladder adult (RPKM 13.4), CNS E11.5 (RPKM 9.1) and 28 other tissues See more
    Orthologs

    Genomic context

    See Cyb5d1 in Genome Data Viewer
    Location:
    11; 11 B3
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 11 NC_000077.6 (69390930..69395469, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 11 NC_000077.5 (69207118..69208848, complement)

    Chromosome 11 - NC_000077.6Genomic Context describing neighboring genes Neighboring gene chromodomain helicase DNA binding protein 3 Neighboring gene predicted gene, 32483 Neighboring gene transmembrane protein 88 Neighboring gene N(alpha)-acetyltransferase 38, NatC auxiliary subunit Neighboring gene KDM1 lysine (K)-specific demethylase 6B

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (2) 

    General gene information

    Homology

    Clone Names

    • MGC118302

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    cytochrome b5 domain-containing protein 1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001045525.2NP_001038990.1  cytochrome b5 domain-containing protein 1

      See identical proteins and their annotated locations for NP_001038990.1

      Status: VALIDATED

      Source sequence(s)
      AL596125
      Consensus CDS
      CCDS24892.1
      UniProtKB/Swiss-Prot
      Q5NCY3
      Related
      ENSMUSP00000059709.4, ENSMUST00000051620.4
      Conserved Domains (1) summary
      pfam00173
      Location:1973
      Cyt-b5; Cytochrome b5-like Heme/Steroid binding domain

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000077.6 Reference GRCm38.p4 C57BL/6J

      Range
      69390930..69395469 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011249073.2XP_011247375.1  cytochrome b5 domain-containing protein 1 isoform X1

      See identical proteins and their annotated locations for XP_011247375.1

      UniProtKB/Swiss-Prot
      Q5NCY3
      Conserved Domains (1) summary
      pfam00173
      Location:1973
      Cyt-b5; Cytochrome b5-like Heme/Steroid binding domain
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