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    rac1a Rac family small GTPase 1a [ Danio rerio (zebrafish) ]

    Gene ID: 327204, updated on 8-Dec-2018

    Summary

    Official Symbol
    rac1aprovided by ZNC
    Official Full Name
    Rac family small GTPase 1aprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-030131-5415
    See related
    Ensembl:ENSDARG00000074849
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio
    Also known as
    rac1; zgc:55823; zgc:55917; zgc:86934; wu:fd16e02

    Genomic context

    See rac1a in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 12 NC_007123.7 (10464897..10476337, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 12 NC_007123.6 (10427054..10438494, complement)

    Chromosome 12 - NC_007123.7Genomic Context describing neighboring genes Neighboring gene SNU13 homolog, small nuclear ribonucleoprotein b (U4/U6.U5) Neighboring gene crystallin, mu Neighboring gene zgc:152977 Neighboring gene myoferlin

    Genomic regions, transcripts, and products

    Bibliography

    Related articles in PubMed

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

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    General gene information

    Markers

    Homology

    Clone Names

    • MGC55823

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    GTP binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    GTP binding IEA
    Inferred from Electronic Annotation
    more info
     
    GTPase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    GTPase activity IEA
    Inferred from Electronic Annotation
    more info
     
    nucleotide binding IEA
    Inferred from Electronic Annotation
    more info
     
    protein kinase binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Process Evidence Code Pubs
    Rac protein signal transduction IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Rho protein signal transduction IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    actin cytoskeleton organization IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    cell migration IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    cell migration involved in gastrulation IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    cell projection assembly IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    motor neuron axon guidance IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    myoblast fusion IDA
    Inferred from Direct Assay
    more info
    PubMed 
    myoblast fusion IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    neutrophil chemotaxis IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    regulation of neutrophil migration IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    small GTPase mediated signal transduction IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    cell projection IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    cytoplasmic vesicle IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 

    General protein information

    Preferred Names
    ras-related C3 botulinum toxin substrate 1
    Names
    RAS-related C3 botulinum substrate 1
    ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)
    ras-related C3 botulinum toxin substrate 1a (rho family, small GTP binding protein Rac1)

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_199771.1NP_956065.1  ras-related C3 botulinum toxin substrate 1

      See identical proteins and their annotated locations for NP_956065.1

      Status: PROVISIONAL

      Source sequence(s)
      BC044538
      UniProtKB/TrEMBL
      Q7ZSZ9
      Related
      ENSDARP00000096950.4, ENSDART00000106172.5
      Conserved Domains (2) summary
      smart00174
      Location:6179
      RHO; Rho (Ras homology) subfamily of Ras-like small GTPases
      cd01871
      Location:3176
      Rac1_like; Ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)-like consists of Rac1, Rac2 and Rac3

    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007123.7 Reference GRCz11 Primary Assembly

      Range
      10464897..10476337 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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