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    Lmbrd2 LMBR1 domain containing 2 [ Mus musculus (house mouse) ]

    Gene ID: 320506, updated on 31-Jan-2019

    Summary

    Official Symbol
    Lmbrd2provided by MGI
    Official Full Name
    LMBR1 domain containing 2provided by MGI
    Primary source
    MGI:MGI:2444173
    See related
    Ensembl:ENSMUSG00000039704
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    9930036E21Rik
    Expression
    Ubiquitous expression in kidney adult (RPKM 5.7), genital fat pad adult (RPKM 4.3) and 28 other tissues See more
    Orthologs

    Genomic context

    See Lmbrd2 in Genome Data Viewer
    Location:
    15; 15 A1
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 15 NC_000081.6 (9140530..9197845)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 15 NC_000081.5 (9070326..9127206)

    Chromosome 15 - NC_000081.6Genomic Context describing neighboring genes Neighboring gene RAN binding protein 3-like Neighboring gene predicted gene, 46511 Neighboring gene NAD kinase 2, mitochondrial Neighboring gene S-phase kinase-associated protein 2 (p45) Neighboring gene UDP glycosyltransferases 3 family pseudogene Neighboring gene UDP glycosyltransferases 3 family, polypeptide A1

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Gene trapped (1) 

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    LMBR1 domain-containing protein 2

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_177178.3NP_796152.2  LMBR1 domain-containing protein 2

      See identical proteins and their annotated locations for NP_796152.2

      Status: PROVISIONAL

      Source sequence(s)
      AK079450
      Consensus CDS
      CCDS37039.1
      UniProtKB/Swiss-Prot
      Q8C561
      Related
      ENSMUSP00000154020.1, ENSMUST00000227556.1
      Conserved Domains (1) summary
      pfam04791
      Location:22546
      LMBR1; LMBR1-like membrane protein

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000081.6 Reference GRCm38.p4 C57BL/6J

      Range
      9140530..9197845
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006520091.3XP_006520154.1  LMBR1 domain-containing protein 2 isoform X1

      See identical proteins and their annotated locations for XP_006520154.1

      UniProtKB/Swiss-Prot
      Q8C561
      Related
      ENSMUSP00000087858.5, ENSMUST00000090380.5
      Conserved Domains (1) summary
      pfam04791
      Location:22546
      LMBR1; LMBR1-like membrane protein
    2. XM_006520093.2XP_006520156.1  LMBR1 domain-containing protein 2 isoform X3

      Conserved Domains (1) summary
      pfam04791
      Location:22521
      LMBR1; LMBR1-like membrane protein
    3. XM_006520092.3XP_006520155.1  LMBR1 domain-containing protein 2 isoform X2

      Conserved Domains (1) summary
      pfam04791
      Location:1418
      LMBR1; LMBR1-like membrane protein
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