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    H2bc11 H2B clustered histone 11 [ Mus musculus (house mouse) ]

    Gene ID: 319183, updated on 7-Sep-2023


    Official Symbol
    H2bc11provided by MGI
    Official Full Name
    H2B clustered histone 11provided by MGI
    Primary source
    See related
    Ensembl:ENSMUSG00000069300 AllianceGenome:MGI:2448388
    Gene type
    protein coding
    RefSeq status
    Mus musculus
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    H2bc7; H2bc13; H2bc15; Hist1h2bj
    Histones are basic nuclear proteins that are responsible for the nucleosome structure of the chromosomal fiber in eukaryotes. Two molecules of each of the four core histones (H2A, H2B, H3, and H4) form an octamer, around which approximately 146 bp of DNA is wrapped in repeating units, called nucleosomes. The linker histone, H1, interacts with linker DNA between nucleosomes and functions in the compaction of chromatin into higher order structures. This gene is intronless and encodes a replication-dependent histone that is a member of the histone H2B family. Transcripts from this gene lack polyA tails but instead contain a palindromic termination element. [provided by RefSeq, Aug 2015]
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    Genomic context

    See H2bc11 in Genome Data Viewer
    13 A3.1; 13 8.15 cM
    Exon count:
    Annotation release Status Assembly Chr Location
    RS_2023_04 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (22227368..22227828)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (22043198..22043658)

    Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene H4 clustered histone 9 Neighboring gene H2A clustered histone 11 Neighboring gene CapStarr-seq enhancer MGSCv37_chr13:22142903-22143012 Neighboring gene nuclear encoded tRNA serine 5 (anticodon GCT) Neighboring gene vomeronasal 1 receptor, pseudogene 92

    Genomic regions, transcripts, and products


    Products Interactant Other Gene Complex Source Pubs Description

    General gene information


    Gene Ontology Provided by MGI

    Component Evidence Code Pubs
    located_in cytosol ISO
    Inferred from Sequence Orthology
    more info
    located_in nucleoplasm ISO
    Inferred from Sequence Orthology
    more info
    located_in nucleus ISO
    Inferred from Sequence Orthology
    more info

    General protein information

    Preferred Names
    histone H2B type 1-F/J/L
    H2B 291A
    histone 1, H2bj
    histone cluster 1, H2bj

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_178198.3NP_835505.1  histone H2B type 1-F/J/L

      See identical proteins and their annotated locations for NP_835505.1

      Status: REVIEWED

      Source sequence(s)
      Consensus CDS
      P10853, Q5SZZ3
      ENSMUSP00000106082.2, ENSMUST00000110452.2
      Conserved Domains (1) summary
      H2B; Histone H2B

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2023_04

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J


    1. NC_000079.7 Reference GRCm39 C57BL/6J

      GenBank, FASTA, Sequence Viewer (Graphics)