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    CG12121 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 31866, updated on 4-Apr-2024

    Summary

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    Official Symbol
    CG12121provided by FlyBase
    Primary source
    FLYBASE:FBgn0030109
    Locus tag
    Dmel_CG12121
    See related
    AllianceGenome:FB:FBgn0030109
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG12121
    Summary
    Predicted to be integral component of membrane. Predicted to be active in Golgi apparatus and membrane. Is expressed in adult head. Orthologous to human GPR107 (G protein-coupled receptor 107) and GPR108 (G protein-coupled receptor 108). [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    Location:
    8D2-8D2; 1-27 cM
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (9228796..9232378, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (9122829..9126411, complement)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene tan Neighboring gene uncharacterized protein Neighboring gene Gustatory receptor 8a Neighboring gene Ionotropic receptor 8a Neighboring gene mir-4916 stem loop Neighboring gene multi sex combs

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Ancient balancing selection at tan underlies female colour dimorphism in Drosophila erecta. Yassin A, et al. Nat Commun, 2016 Jan 18. PMID 26778363, Free PMC Article
    2. Putative synaptic genes defined from a Drosophila whole body developmental transcriptome by a machine learning approach. Pazos Obregón F, et al. BMC Genomics, 2015 Sep 15. PMID 26370122, Free PMC Article
    3. Protein interaction mapping: a Drosophila case study. Formstecher E, et al. Genome Res, 2005 Mar. PMID 15710747, Free PMC Article
    4. Transcriptomic analysis of inbreeding depression in cold-sensitive Drosophila melanogaster shows upregulation of the immune response. Vermeulen CJ, et al. J Evol Biol, 2013 Sep. PMID 23944235
    5. mRNA-Associated Processes and Their Influence on Exon-Intron Structure in Drosophila melanogaster. Lepennetier G, et al. G3 (Bethesda), 2016 Jun 1. PMID 27172210, Free PMC Article

    See all (24) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Process Evidence Code Pubs
    involved_in transport IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in Golgi apparatus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG12121-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      9228796..9232378 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_132317.2 → NP_572545.1  uncharacterized protein Dmel_CG12121 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_572545.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9W366
      Related
      FBpp0071269
      Conserved Domains (3) summary
      pfam06614
      Location:195 → 353
      Neuromodulin; Neuromodulin
      pfam06814
      Location:387 → 671
      Lung_7-TM_R; Lung seven transmembrane receptor
      pfam14153
      Location:194 → 290
      Spore_coat_CotO; Spore coat protein CotO
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9W366 Q9W366

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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