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    Zar1 zygote arrest 1 [ Mus musculus (house mouse) ]

    Gene ID: 317755, updated on 27-Jan-2018

    Summary

    Official Symbol
    Zar1provided by MGI
    Official Full Name
    zygote arrest 1provided by MGI
    Primary source
    MGI:MGI:2180337
    See related
    Ensembl:ENSMUSG00000063935 Vega:OTTMUSG00000026978
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Expression
    Restricted expression toward ovary adult (RPKM 33.1) See more
    Orthologs

    Genomic context

    See Zar1 in Genome Data Viewer
    Location:
    5; 5 C3.2
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 5 NC_000071.6 (72577113..72581362, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 5 NC_000071.5 (72968353..72972323, complement)

    Chromosome 5 - NC_000071.6Genomic Context describing neighboring genes Neighboring gene nuclear transcription factor, X-box binding-like 1 Neighboring gene uncharacterized LOC108169048 Neighboring gene predicted gene 5868 Neighboring gene cyclic nucleotide gated channel alpha 1 Neighboring gene predicted gene 5297

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    General gene information

    Markers

    Homology

    Clone Names

    • MGC123986, MGC123987

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    biological_process ND
    No biological Data available
    more info
     
    multicellular organism development IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    cytoplasm IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    zygote arrest protein 1
    Names
    oocyte-specific maternal effect factor

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_174877.3NP_777366.1  zygote arrest protein 1

      See identical proteins and their annotated locations for NP_777366.1

      Status: VALIDATED

      Source sequence(s)
      BC099399, DV647930
      Consensus CDS
      CCDS19331.1
      UniProtKB/Swiss-Prot
      Q80SU3
      Related
      ENSMUSP00000073221.2, OTTMUSP00000033455, ENSMUST00000073528.3, OTTMUST00000066679
      Conserved Domains (1) summary
      pfam13695
      Location:262347
      zf-3CxxC; Zinc-binding domain

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000071.6 Reference GRCm38.p4 C57BL/6J

      Range
      72577113..72581362 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006503990.3XP_006504053.1  zygote arrest protein 1 isoform X1

      Conserved Domains (1) summary
      pfam13695
      Location:265303
      zf-3CxxC; Zinc-binding domain
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