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    Zar1 zygote arrest 1 [ Mus musculus (house mouse) ]

    Gene ID: 317755, updated on 31-Aug-2021

    Summary

    Official Symbol
    Zar1provided by MGI
    Official Full Name
    zygote arrest 1provided by MGI
    Primary source
    MGI:MGI:2180337
    See related
    Ensembl:ENSMUSG00000063935
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Expression
    Restricted expression toward ovary adult (RPKM 33.1) See more
    Orthologs
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    Genomic context

    See Zar1 in Genome Data Viewer
    Location:
    5; 5 C3.2
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (72734456..72738707, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (72577113..72581361, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 5 NC_000071.5 (72968353..72972323, complement)

    Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene nuclear transcription factor, X-box binding-like 1 Neighboring gene predicted gene, 34144 Neighboring gene solute carrier family 10 (sodium/bile acid cotransporter family), pseudogene Neighboring gene cyclic nucleotide gated channel alpha 1 Neighboring gene predicted gene 5297

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    General gene information

    Markers

    Homology

    Clone Names

    • MGC123986, MGC123987

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables mRNA binding involved in posttranscriptional gene silencing IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within multicellular organism development IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in translation IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    zygote arrest protein 1
    Names
    oocyte-specific maternal effect factor

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_174877.3NP_777366.1  zygote arrest protein 1

      See identical proteins and their annotated locations for NP_777366.1

      Status: VALIDATED

      Source sequence(s)
      BC099399, DV647930
      Consensus CDS
      CCDS19331.1
      UniProtKB/Swiss-Prot
      Q80SU3
      Related
      ENSMUSP00000073221.3, ENSMUST00000073528.4
      Conserved Domains (1) summary
      pfam13695
      Location:262347
      zf-3CxxC; Zinc-binding domain

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000071.7 Reference GRCm39 C57BL/6J

      Range
      72734456..72738707 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006503990.5XP_006504053.1  zygote arrest protein 1 isoform X1

      Conserved Domains (1) summary
      PRK07764
      Location:160263
      PRK07764; DNA polymerase III subunits gamma and tau; Validated
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