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    Fbxl6 F-box and leucine-rich repeat protein 6 [ Mus musculus (house mouse) ]

    Gene ID: 30840, updated on 9-Sep-2018

    Summary

    Official Symbol
    Fbxl6provided by MGI
    Official Full Name
    F-box and leucine-rich repeat protein 6provided by MGI
    Primary source
    MGI:MGI:1354705
    See related
    Ensembl:ENSMUSG00000022559
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Fbl6; AU021795
    Expression
    Ubiquitous expression in ovary adult (RPKM 75.4), adrenal adult (RPKM 61.6) and 28 other tissues See more
    Orthologs

    Genomic context

    See Fbxl6 in Genome Data Viewer
    Location:
    15; 15 D3
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 15 NC_000081.6 (76535723..76538746, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 15 NC_000081.5 (76366153..76369176, complement)

    Chromosome 15 - NC_000081.6Genomic Context describing neighboring genes Neighboring gene predicted gene, 46533 Neighboring gene transmembrane protein 249 Neighboring gene solute carrier protein 52, member 2 Neighboring gene predicted gene, 35739

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    contributes_to ubiquitin protein ligase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Process Evidence Code Pubs
    SCF-dependent proteasomal ubiquitin-dependent protein catabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Component Evidence Code Pubs
    SCF ubiquitin ligase complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 

    General protein information

    Preferred Names
    F-box/LRR-repeat protein 6
    Names
    F-box protein FBL6
    F-box protein containing leucine repeats 6

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_013909.2NP_038937.2  F-box/LRR-repeat protein 6

      See identical proteins and their annotated locations for NP_038937.2

      Status: VALIDATED

      Source sequence(s)
      AF176522, AK040458, BC054377
      Consensus CDS
      CCDS49653.1
      UniProtKB/Swiss-Prot
      Q9QXW0
      Related
      ENSMUSP00000023219.7, ENSMUST00000023219.8
      Conserved Domains (3) summary
      cd09293
      Location:171390
      AMN1; Antagonist of mitotic exit network protein 1
      sd00034
      Location:188213
      LRR_AMN1; leucine-rich repeat [structural motif]
      pfam12937
      Location:105155
      F-box-like; F-box-like

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000081.6 Reference GRCm38.p4 C57BL/6J

      Range
      76535723..76538746 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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