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    GOLGA6L1 golgin A6 family like 1 [ Homo sapiens (human) ]

    Gene ID: 283767, updated on 27-Nov-2024

    Summary

    Official Symbol
    GOLGA6L1provided by HGNC
    Official Full Name
    golgin A6 family like 1provided by HGNC
    Primary source
    HGNC:HGNC:37444
    See related
    Ensembl:ENSG00000273976 AllianceGenome:HGNC:37444
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Restricted expression toward testis (RPKM 6.6) See more
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    Genomic context

    See GOLGA6L1 in Genome Data Viewer
    Location:
    15q11.2
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 15 NC_000015.10 (23127066..23136822, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 15 NC_060939.1 (20810829..20820625, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 15 NC_000015.9 (22736246..22746002)

    Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene engulfment and cell motility 2 pseudogene 1 Neighboring gene WAS/WASL-interacting protein family member 3-like Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:22744007-22744507 Neighboring gene NANOG hESC enhancer GRCh37_chr15:22740333-22740853 Neighboring gene MPHOSPH10 pseudogene 5 Neighboring gene golgin A8 family member D, pseudogene Neighboring gene RNA, 7SL, cytoplasmic 106, pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General protein information

    Preferred Names
    golgin subfamily A member 6-like protein 1
    Names
    golgi autoantigen, golgin subfamily a, 6-like 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001001413.3NP_001001413.3  golgin subfamily A member 6-like protein 1

      Status: VALIDATED

      Source sequence(s)
      AC116165
      Consensus CDS
      CCDS73699.1
      UniProtKB/Swiss-Prot
      A0A087WU96, Q8N7Z2
      Related
      ENSP00000478478.1, ENST00000614055.2
      Conserved Domains (3) summary
      cl25716
      Location:150
      Amelogenin; Amelogenin
      cl25751
      Location:598
      DUF4045; Domain of unknown function (DUF4045)
      cl26511
      Location:185658
      Neuromodulin_N; Gap junction protein N-terminal region

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000015.10 Reference GRCh38.p14 Primary Assembly

      Range
      23127066..23136822 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCh38.p14 PATCHES

    Genomic

    1. NW_021160017.1 Reference GRCh38.p14 PATCHES

      Range
      4021809..4031548 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCh38.p14 ALT_REF_LOCI_1

    Genomic

    1. NT_187603.1 Reference GRCh38.p14 ALT_REF_LOCI_1

      Range
      227574..237330 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCh38.p14 ALT_REF_LOCI_2

    Genomic

    1. NT_187659.1 Reference GRCh38.p14 ALT_REF_LOCI_2

      Range
      96576..106332 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060939.1 Alternate T2T-CHM13v2.0

      Range
      20810829..20820625 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_054377744.1XP_054233719.1  golgin subfamily A member 6-like protein 1 isoform X2

    2. XM_054377743.1XP_054233718.1  golgin subfamily A member 6-like protein 1 isoform X1