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    HP haptoglobin [ Bos taurus (cattle) ]

    Gene ID: 280692, updated on 18-Feb-2019

    Summary

    Gene symbol
    HP
    Gene description
    haptoglobin
    See related
    BGD:BT10702; Ensembl:ENSBTAG00000006354
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos

    Genomic context

    Location:
    chromosome: 18
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    106 current ARS-UCD1.2 (GCF_002263795.1) 18 NC_037345.1 (39037405..39043561, complement)
    105 previous assembly Bos_taurus_UMD_3.1.1 (GCF_000003055.6) 18 AC_000175.1 (39173137..39179293, complement)

    Chromosome 18 - NC_037345.1Genomic Context describing neighboring genes Neighboring gene DEAH-box helicase 38 Neighboring gene thioredoxin like 4B Neighboring gene uncharacterized LOC107133343 Neighboring gene dihydroorotate dehydrogenase (quinone) Neighboring gene polycystin 1 like 3, transient receptor potential channel interacting

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Pathways from BioSystems

    General gene information

    Markers

    Homology

    Clone Names

    • MGC133752

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    antioxidant activity IEA
    Inferred from Electronic Annotation
    more info
     
    hemoglobin binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    acute-phase response IEA
    Inferred from Electronic Annotation
    more info
     
    cellular oxidant detoxification IEA
    Inferred from Electronic Annotation
    more info
     
    defense response to bacterium IEA
    Inferred from Electronic Annotation
    more info
     
    immune system process IEA
    Inferred from Electronic Annotation
    more info
     
    proteolysis IEA
    Inferred from Electronic Annotation
    more info
     

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001040470.2NP_001035560.1  haptoglobin precursor

      See identical proteins and their annotated locations for NP_001035560.1

      Status: PROVISIONAL

      Source sequence(s)
      BC109668
      UniProtKB/Swiss-Prot
      Q2TBU0
      UniProtKB/TrEMBL
      A0A0M4MD57
      Related
      ENSBTAP00000008335.5, ENSBTAT00000008335.5
      Conserved Domains (3) summary
      cd00033
      Location:87141
      CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
      smart00020
      Location:156394
      Tryp_SPc; Trypsin-like serine protease
      cd00190
      Location:157397
      Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...

    RefSeqs of Annotated Genomes: Bos taurus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD1.2 Primary Assembly

    Genomic

    1. NC_037345.1 Reference ARS-UCD1.2 Primary Assembly

      Range
      39037405..39043561 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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