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    Armcx6 armadillo repeat containing, X-linked 6 [ Mus musculus (house mouse) ]

    Gene ID: 278097, updated on 23-Jun-2021

    Summary

    Official Symbol
    Armcx6provided by MGI
    Official Full Name
    armadillo repeat containing, X-linked 6provided by MGI
    Primary source
    MGI:MGI:2147993
    See related
    Ensembl:ENSMUSG00000050394
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    AW060994
    Expression
    Broad expression in CNS E18 (RPKM 11.4), limb E14.5 (RPKM 11.0) and 18 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Armcx6 in Genome Data Viewer
    Location:
    X; X E3
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) X NC_000086.8 (133649204..133657236, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (134748455..134756666, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) X NC_000086.6 (131282994..131285958, complement)

    Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene armadillo repeat containing, X-linked 1 Neighboring gene armadillo repeat containing, X-linked 6 pseudogene Neighboring gene microRNA 7093 Neighboring gene armadillo repeat containing, X-linked 3 Neighboring gene armadillo repeat containing, X-linked 2

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Markers

    Homology

    Clone Names

    • MGC27863

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    located_in integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in mitochondrial outer membrane IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in mitochondrion IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001007578.2NP_001007579.1  protein ARMCX6

      See identical proteins and their annotated locations for NP_001007579.1

      Status: VALIDATED

      Source sequence(s)
      AK160766, AL772348, BY777182
      Consensus CDS
      CCDS30399.1
      UniProtKB/Swiss-Prot
      Q8K3A6
      Related
      ENSMUSP00000057277.6, ENSMUST00000052431.12
      Conserved Domains (1) summary
      pfam04826
      Location:116299
      Arm_2; Armadillo-like

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000086.8 Reference GRCm39 C57BL/6J

      Range
      133649204..133657236 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011247745.3XP_011246047.1  protein ARMCX6 isoform X1

      See identical proteins and their annotated locations for XP_011246047.1

      UniProtKB/Swiss-Prot
      Q8K3A6
      Conserved Domains (1) summary
      pfam04826
      Location:116299
      Arm_2; Armadillo-like
    2. XM_036161974.1XP_036017867.1  protein ARMCX6 isoform X1

      Conserved Domains (1) summary
      pfam04826
      Location:116299
      Arm_2; Armadillo-like
    3. XM_011247746.3XP_011246048.1  protein ARMCX6 isoform X1

      See identical proteins and their annotated locations for XP_011246048.1

      UniProtKB/Swiss-Prot
      Q8K3A6
      Conserved Domains (1) summary
      pfam04826
      Location:116299
      Arm_2; Armadillo-like
    4. XM_036161975.1XP_036017868.1  protein ARMCX6 isoform X1

      Conserved Domains (1) summary
      pfam04826
      Location:116299
      Arm_2; Armadillo-like
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