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    Gpr107 G protein-coupled receptor 107 [ Mus musculus (house mouse) ]

    Gene ID: 277463, updated on 31-Jan-2019

    Summary

    Official Symbol
    Gpr107provided by MGI
    Official Full Name
    G protein-coupled receptor 107provided by MGI
    Primary source
    MGI:MGI:2139054
    See related
    Ensembl:ENSMUSG00000000194
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    AI790205; mKIAA1624; C530034M11; 9930033D15Rik
    Expression
    Ubiquitous expression in large intestine adult (RPKM 14.2), colon adult (RPKM 13.4) and 28 other tissues See more
    Orthologs

    Genomic context

    See Gpr107 in Genome Data Viewer
    Location:
    2; 2 B
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 2 NC_000068.7 (31152316..31216567)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 2 NC_000068.6 (31007836..31072087)

    Chromosome 2 - NC_000068.7Genomic Context describing neighboring genes Neighboring gene formin binding protein 1 Neighboring gene RIKEN cDNA D330023K18 gene Neighboring gene neuronal calcium sensor 1 Neighboring gene predicted gene, 32866 Neighboring gene hemicentin 2

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Pathways from BioSystems

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    clathrin heavy chain binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    clathrin-dependent endocytosis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    Golgi apparatus ISO
    Inferred from Sequence Orthology
    more info
     
    clathrin-coated vesicle IDA
    Inferred from Direct Assay
    more info
    PubMed 
    early endosome IDA
    Inferred from Direct Assay
    more info
    PubMed 
    integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    membrane IEA
    Inferred from Electronic Annotation
    more info
     
    nucleoplasm ISO
    Inferred from Sequence Orthology
    more info
     

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_178760.4NP_848875.2  protein GPR107 precursor

      See identical proteins and their annotated locations for NP_848875.2

      Status: VALIDATED

      Source sequence(s)
      AK030433, AK034815, BY286814
      Consensus CDS
      CCDS15895.1
      UniProtKB/Swiss-Prot
      Q8BUV8
      UniProtKB/TrEMBL
      Q148Z6
      Related
      ENSMUSP00000056739.5, ENSMUST00000056433.6
      Conserved Domains (1) summary
      pfam06814
      Location:214504
      Lung_7-TM_R; Lung seven transmembrane receptor

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000068.7 Reference GRCm38.p4 C57BL/6J

      Range
      31152316..31216567
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_001782976.1 RNA Sequence

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