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    Dnajb9 DnaJ heat shock protein family (Hsp40) member B9 [ Mus musculus (house mouse) ]

    Gene ID: 27362, updated on 31-Jan-2019

    Summary

    Official Symbol
    Dnajb9provided by MGI
    Official Full Name
    DnaJ heat shock protein family (Hsp40) member B9provided by MGI
    Primary source
    MGI:MGI:1351618
    See related
    Ensembl:ENSMUSG00000014905
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Mdg1; mDj7; ERdj4; AA408011; AA673251; AA673481; AW556981
    Expression
    Ubiquitous expression in placenta adult (RPKM 14.5), testis adult (RPKM 10.5) and 24 other tissues See more
    Orthologs

    Genomic context

    See Dnajb9 in Genome Data Viewer
    Location:
    12; 12 B2
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 12 NC_000078.6 (44205897..44210068, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 12 NC_000078.5 (45306884..45311055, complement)

    Chromosome 12 - NC_000078.6Genomic Context describing neighboring genes Neighboring gene predicted gene, 46349 Neighboring gene ribosomal protein S2 pseudogene Neighboring gene microRNA 5627 Neighboring gene nuclear assembly factor 1 homolog pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Gene trapped (1) 
    • Endonuclease-mediated (1) 

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    Hsp70 protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    chaperone binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    misfolded protein binding ISO
    Inferred from Sequence Orthology
    more info
     
    protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    B cell differentiation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    immunoglobulin production IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    response to endoplasmic reticulum stress IDA
    Inferred from Direct Assay
    more info
    PubMed 
    response to unfolded protein IEA
    Inferred from Electronic Annotation
    more info
     
    ubiquitin-dependent ERAD pathway IDA
    Inferred from Direct Assay
    more info
    PubMed 
    ubiquitin-dependent ERAD pathway ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    cytoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    endoplasmic reticulum IDA
    Inferred from Direct Assay
    more info
    PubMed 
    endoplasmic reticulum ISO
    Inferred from Sequence Orthology
    more info
     
    endoplasmic reticulum lumen IDA
    Inferred from Direct Assay
    more info
    PubMed 
    nucleolus ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    dnaJ homolog subfamily B member 9
    Names
    DNA j protein b9
    DnaJ (Hsp40) homolog, subfamily B, member 9
    ER-resident protein ERdj4
    endoplasmic reticulum DNA J domain-containing protein 4
    microvascular endothelial differentiation gene 1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_013760.4NP_038788.2  dnaJ homolog subfamily B member 9 precursor

      See identical proteins and their annotated locations for NP_038788.2

      Status: PROVISIONAL

      Source sequence(s)
      AK005475
      Consensus CDS
      CCDS25897.1
      UniProtKB/Swiss-Prot
      Q9QYI6
      Related
      ENSMUSP00000015049.3, ENSMUST00000015049.4
      Conserved Domains (1) summary
      pfam00226
      Location:2687
      DnaJ; DnaJ domain

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000078.6 Reference GRCm38.p4 C57BL/6J

      Range
      44205897..44210068 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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