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    Arsj arylsulfatase J [ Mus musculus (house mouse) ]

    Gene ID: 271970, updated on 23-Jun-2021

    Summary

    Official Symbol
    Arsjprovided by MGI
    Official Full Name
    arylsulfatase Jprovided by MGI
    Primary source
    MGI:MGI:2443513
    See related
    Ensembl:ENSMUSG00000046561
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    D830047F08; 9330196J05Rik
    Expression
    Broad expression in limb E14.5 (RPKM 1.9), bladder adult (RPKM 1.7) and 15 other tissues See more
    Orthologs
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    Genomic context

    See Arsj in Genome Data Viewer
    Location:
    3; 3 G1
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (126157501..126234023)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (126363852..126440374)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 3 NC_000069.5 (126066770..126143292)

    Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 40146 Neighboring gene family with sequence similarity 98, member B pseudogene Neighboring gene predicted gene, 35408 Neighboring gene 40S ribosomal protein S28 pseudogene Neighboring gene predicted gene, 46823

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables catalytic activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables sulfuric ester hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in actin cytoskeleton ISO
    Inferred from Sequence Orthology
    more info
     
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    arylsulfatase J
    Names
    ASJ
    NP_775627.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_173451.3NP_775627.1  arylsulfatase J precursor

      See identical proteins and their annotated locations for NP_775627.1

      Status: VALIDATED

      Source sequence(s)
      AK034454
      Consensus CDS
      CCDS17822.1
      UniProtKB/Swiss-Prot
      Q8BM89
      UniProtKB/TrEMBL
      Q32KI8
      Related
      ENSMUSP00000091511.3, ENSMUST00000093976.4
      Conserved Domains (3) summary
      COG3119
      Location:71507
      AslA; Arylsulfatase A or related enzyme [Inorganic ion transport and metabolism]
      cd16029
      Location:74507
      4-S; N-acetylgalactosamine 4-sulfatase, also called arylsulftase B
      cl20644
      Location:493531
      DUF4976; Domain of unknown function (DUF4976)

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000069.7 Reference GRCm39 C57BL/6J

      Range
      126157501..126234023
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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