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    Zbtb11 zinc finger and BTB domain containing 11 [ Mus musculus (house mouse) ]

    Gene ID: 271377, updated on 25-Sep-2017

    Summary

    Official Symbol
    Zbtb11provided by MGI
    Official Full Name
    zinc finger and BTB domain containing 11provided by MGI
    Primary source
    MGI:MGI:2443876
    See related
    Ensembl:ENSMUSG00000022601 Vega:OTTMUSG00000044524
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    ZNF-U69274; 9230110G02Rik
    Expression
    Ubiquitous expression in adrenal adult (RPKM 7.2), cerebellum adult (RPKM 5.4) and 28 other tissues See more
    Orthologs

    Genomic context

    See Zbtb11 in Genome Data Viewer
    Location:
    16; 16 C1.1
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 16 NC_000082.6 (55973273..56008913)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 16 NC_000082.5 (55973917..56009026)

    Chromosome 16 - NC_000082.6Genomic Context describing neighboring genes Neighboring gene predicted gene 6958 Neighboring gene ribosomal protein L24 Neighboring gene zinc finger and BTB domain containing 11, opposite strand 1 Neighboring gene PEST proteolytic signal containing nuclear protein Neighboring gene tRNA methyltransferase 10C

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    nucleoplasm ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    zinc finger and BTB domain-containing protein 11

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_173026.2NP_766614.2  zinc finger and BTB domain-containing protein 11

      See identical proteins and their annotated locations for NP_766614.2

      Status: VALIDATED

      Source sequence(s)
      AC171202
      Consensus CDS
      CCDS49874.1
      UniProtKB/TrEMBL
      G5E8B9
      Related
      ENSMUSP00000056923.7, OTTMUSP00000065527, ENSMUST00000050248.8, OTTMUST00000117177
      Conserved Domains (5) summary
      smart00225
      Location:215306
      BTB; Broad-Complex, Tramtrack and Bric a brac
      COG5048
      Location:664837
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:678698
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00651
      Location:204305
      BTB; BTB/POZ domain
      pfam13465
      Location:897920
      zf-H2C2_2; Zinc-finger double domain

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000082.6 Reference GRCm38.p4 C57BL/6J

      Range
      55973273..56008913
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_001781827.1 RNA Sequence

    2. XR_001781828.1 RNA Sequence

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