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    Klhl18 kelch-like 18 [ Mus musculus (house mouse) ]

    Gene ID: 270201, updated on 15-Feb-2018

    Summary

    Official Symbol
    Klhl18provided by MGI
    Official Full Name
    kelch-like 18provided by MGI
    Primary source
    MGI:MGI:2143315
    See related
    Ensembl:ENSMUSG00000054792 Vega:OTTMUSG00000023208
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    AW545966; A930041K15
    Expression
    Ubiquitous expression in CNS E18 (RPKM 10.6), whole brain E14.5 (RPKM 7.6) and 28 other tissues See more
    Orthologs

    Genomic context

    See Klhl18 in Genome Data Viewer
    Location:
    9; 9 F2
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 9 NC_000075.6 (110425926..110476694, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 9 NC_000075.5 (110328430..110379198, complement)

    Chromosome 9 - NC_000075.6Genomic Context describing neighboring genes Neighboring gene protein tyrosine phosphatase, non-receptor type 23 Neighboring gene neutrophilic granule protein Neighboring gene kinesin family member 9 Neighboring gene SET domain containing 2 Neighboring gene neurotrophin receptor associated death domain

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (1) 

    General gene information

    Markers

    Homology

    Clone Names

    • MGC36415

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001360306.1NP_001347235.1  kelch-like protein 18 isoform 2

      Status: VALIDATED

      Source sequence(s)
      AC132103, AC160104, BC065167
      Conserved Domains (2) summary
      sd00038
      Location:331374
      Kelch; KELCH repeat [structural motif]
      cl28614
      Location:34557
      BTB; Broad-Complex, Tramtrack and Bric a brac
    2. NM_177771.5NP_808439.2  kelch-like protein 18 isoform 1

      Status: VALIDATED

      Source sequence(s)
      AC132103, BC065167, BY195998, BY248410, CB247282, CF739377, CK619719
      Consensus CDS
      CCDS23567.1
      UniProtKB/TrEMBL
      E9Q4F2
      Related
      ENSMUSP00000069674.6, OTTMUSP00000026954, ENSMUST00000068025.12, OTTMUST00000056161
      Conserved Domains (2) summary
      sd00038
      Location:326369
      Kelch; KELCH repeat [structural motif]
      cl28614
      Location:34552
      BTB; Broad-Complex, Tramtrack and Bric a brac

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000075.6 Reference GRCm38.p4 C57BL/6J

      Range
      110425926..110476694 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006512141.3XP_006512204.1  kelch-like protein 18 isoform X1

      UniProtKB/TrEMBL
      A0A0G2JGN5
      Related
      ENSMUSP00000143634.1, OTTMUSP00000027688, ENSMUST00000198164.4, OTTMUST00000057401
      Conserved Domains (2) summary
      sd00038
      Location:331374
      Kelch; KELCH repeat [structural motif]
      cl28614
      Location:34557
      BTB; Broad-Complex, Tramtrack and Bric a brac
    2. XM_017313405.1XP_017168894.1  kelch-like protein 18 isoform X2

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