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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_016650.1 RefSeqGene
- Range
-
5001..8035
- Download
- GenBank, FASTA, Sequence Viewer (Graphics), LRG_342
mRNA and Protein(s)
-
NM_001099274.3 → NP_001092744.1 TERF1-interacting nuclear factor 2 isoform 1
See identical proteins and their annotated locations for NP_001092744.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes the longest isoform (1), also known as TIN2L.
- Source sequence(s)
-
BC019343
- Consensus CDS
-
CCDS41936.1
- UniProtKB/Swiss-Prot
- Q9BSI4, Q9UHC2
- Related
- ENSP00000267415.7, ENST00000267415.12
- Conserved Domains (2) summary
-
- cd11741
Location:249 → 353
- TIN2_TBM; TRF-binding motif region of TRF-Interacting Nuclear factor 2
- pfam14973
Location:20 → 166
- TINF2_N; TERF1-interacting nuclear factor 2 N-terminus
-
NM_001363668.2 → NP_001350597.1 TERF1-interacting nuclear factor 2 isoform 3
Status: REVIEWED
- Source sequence(s)
-
AK294119, AL096870
- Consensus CDS
-
CCDS86378.1
- Related
- ENSP00000494065.1, ENST00000646753.1
- Conserved Domains (2) summary
-
- cd11741
Location:214 → 318
- TIN2_TBM; TRF-binding motif region of TRF-Interacting Nuclear factor 2
- pfam14973
Location:20 → 131
- TINF2_N; TERF1-interacting nuclear factor 2 N-terminus
-
NM_012461.3 → NP_036593.2 TERF1-interacting nuclear factor 2 isoform 2
See identical proteins and their annotated locations for NP_036593.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) contains additional segments at its 3' end, which results in an early stop codon and a unique 3' UTR, compared to variant 1. It encodes isoform 2, also known as TIN2S, which has a shorter C-terminus when compared to isoform 1.
- Source sequence(s)
-
AK225379, AL096870, BM549897, DA053760
- Consensus CDS
-
CCDS41937.1
- UniProtKB/Swiss-Prot
-
Q9BSI4
- Related
- ENSP00000382350.4, ENST00000399423.8
- Conserved Domains (2) summary
-
- cd11741
Location:249 → 353
- TIN2_TBM; TRF-binding motif region of TRF-Interacting Nuclear factor 2
- pfam14973
Location:20 → 166
- TINF2_N; TERF1-interacting nuclear factor 2 N-terminus
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000014.9 Reference GRCh38.p14 Primary Assembly
- Range
-
24239640..24242674 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_011536642.3 → XP_011534944.1 TERF1-interacting nuclear factor 2 isoform X2
- Related
- ENSP00000514528.1, ENST00000699701.1
- Conserved Domains (1) summary
-
- pfam14973
Location:20 → 166
- TINF2_N; TERF1-interacting nuclear factor 2 N-terminus
-
XM_017021217.2 → XP_016876706.1 TERF1-interacting nuclear factor 2 isoform X1
Reference GRCh38.p14 PATCHES
Genomic
-
NW_018654722.1 Reference GRCh38.p14 PATCHES
- Range
-
540618..543652 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate T2T-CHM13v2.0
Genomic
-
NC_060938.1 Alternate T2T-CHM13v2.0
- Range
-
18438013..18441046 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)