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    Hist1h3f histone cluster 1, H3f [ Mus musculus (house mouse) ]

    Gene ID: 260423, updated on 5-Aug-2018

    Summary

    Official Symbol
    Hist1h3fprovided by MGI
    Official Full Name
    histone cluster 1, H3fprovided by MGI
    Primary source
    MGI:MGI:2448329
    See related
    Ensembl:ENSMUSG00000100210 Vega:OTTMUSG00000000572
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Hist1; H3.2-221
    Summary
    Histones are basic nuclear proteins that are responsible for the nucleosome structure of the chromosomal fiber in eukaryotes. This structure consists of approximately 146 bp of DNA wrapped around a nucleosome, an octamer composed of pairs of each of the four core histones (H2A, H2B, H3, and H4). The chromatin fiber is further compacted through the interaction of a linker histone, H1, with the DNA between the nucleosomes to form higher order chromatin structures. This gene is intronless and encodes a replication-dependent histone that is a member of the histone H3 family. Transcripts from this gene lack polyA tails; instead, they contain a palindromic termination element. [provided by RefSeq, Aug 2015]

    Genomic context

    See Hist1h3f in Genome Data Viewer
    Location:
    13 A3.1; 13 9.78 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 13 NC_000079.6 (23544052..23544954)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 13 NC_000079.5 (23635921..23636923)

    Chromosome 13 - NC_000079.6Genomic Context describing neighboring genes Neighboring gene histone cluster 1, H3g Neighboring gene histone cluster 1, H2bh Neighboring gene histone cluster 1, H4f Neighboring gene histone cluster 1, H1d

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Pathways from BioSystems

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Process Evidence Code Pubs
    nucleosome assembly ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    nucleosome ISO
    Inferred from Sequence Orthology
    more info
     
    nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 
    nucleus ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    histone H3.2
    Names
    histone 1, H3f
    histone H3
    histone gene complex 1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_013548.4NP_038576.1  histone H3.2

      See identical proteins and their annotated locations for NP_038576.1

      Status: REVIEWED

      Source sequence(s)
      AC034285
      Consensus CDS
      CCDS26344.1
      UniProtKB/Swiss-Prot
      P84228
      UniProtKB/TrEMBL
      B9EI85
      Related
      ENSMUSP00000074994.2, OTTMUSP00000000539, ENSMUST00000075558.4, OTTMUST00000001159
      Conserved Domains (1) summary
      PTZ00018
      Location:1136
      PTZ00018; histone H3; Provisional

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000079.6 Reference GRCm38.p4 C57BL/6J

      Range
      23544052..23544954
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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