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    Obox5 oocyte specific homeobox 5 [ Mus musculus (house mouse) ]

    Gene ID: 252829, updated on 7-Aug-2018

    Summary

    Official Symbol
    Obox5provided by MGI
    Official Full Name
    oocyte specific homeobox 5provided by MGI
    Primary source
    MGI:MGI:2149035
    See related
    Ensembl:ENSMUSG00000074366 Vega:OTTMUSG00000037567
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    C87544
    Expression
    Restricted expression toward ovary adult (RPKM 2.1) See more

    Genomic context

    See Obox5 in Genome Data Viewer
    Location:
    7; 7 A2
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 7 NC_000073.6 (15750370..15759274)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 7 NC_000073.5 (16335719..16344623)

    Chromosome 7 - NC_000073.6Genomic Context describing neighboring genes Neighboring gene oocyte specific homeobox 4, pseudogene 33 Neighboring gene oocyte specific homeobox 4, pseudogene 34 Neighboring gene oocyte specific homeobox 6 Neighboring gene cone-rod homeobox

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Process Evidence Code Pubs
    biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    cellular_component ND
    No biological Data available
    more info
     

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_145709.2NP_663755.2  oocyte specific homeobox 5

      See identical proteins and their annotated locations for NP_663755.2

      Status: VALIDATED

      Source sequence(s)
      BB701159, CJ052752, DV653414
      Consensus CDS
      CCDS39777.1
      UniProtKB/TrEMBL
      G3X9P6
      Related
      ENSMUSP00000096400.3, OTTMUSP00000054165, ENSMUST00000098802.9, OTTMUST00000096849
      Conserved Domains (1) summary
      cd00086
      Location:95153
      homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000073.6 Reference GRCm38.p4 C57BL/6J

      Range
      15750370..15759274
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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