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    Obox5 oocyte specific homeobox 5 [ Mus musculus (house mouse) ]

    Gene ID: 252829, updated on 23-Nov-2023


    Official Symbol
    Obox5provided by MGI
    Official Full Name
    oocyte specific homeobox 5provided by MGI
    Primary source
    See related
    Ensembl:ENSMUSG00000074366 AllianceGenome:MGI:2149035
    Gene type
    protein coding
    RefSeq status
    Mus musculus
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Is expressed in brain; early conceptus; genitourinary system; and hemolymphoid system. [provided by Alliance of Genome Resources, Apr 2022]
    Restricted expression toward ovary adult (RPKM 2.1) See more
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    Genomic context

    See Obox5 in Genome Data Viewer
    7 A2; 7 8.57 cM
    Exon count:
    Annotation release Status Assembly Chr Location
    RS_2023_04 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (15484295..15493199)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (15750370..15759274)

    Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 23714 Neighboring gene oocyte specific homeobox 4, pseudogene 34 Neighboring gene oocyte specific homeobox 6 Neighboring gene cone-rod homeobox

    Genomic regions, transcripts, and products


    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_145709.2NP_663755.2  oocyte specific homeobox 5

      See identical proteins and their annotated locations for NP_663755.2

      Status: VALIDATED

      Source sequence(s)
      BB701159, CJ052752, DV653414
      Consensus CDS
      G3X9P6, Q7TPZ5
      ENSMUSP00000096400.4, ENSMUST00000098802.10
      Conserved Domains (1) summary
      homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2023_04

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J


    1. NC_000073.7 Reference GRCm39 C57BL/6J

      GenBank, FASTA, Sequence Viewer (Graphics)