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    Dennd11 DENN domain containing 11 [ Mus musculus (house mouse) ]

    Gene ID: 243780, updated on 16-Jul-2021

    Summary

    Official Symbol
    Dennd11provided by MGI
    Official Full Name
    DENN domain containing 11provided by MGI
    Primary source
    MGI:MGI:2444256
    See related
    Ensembl:ENSMUSG00000037172
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Lchn; AI841796; mKIAA1147; E330009J07Rik
    Expression
    Broad expression in cerebellum adult (RPKM 13.8), cortex adult (RPKM 7.2) and 22 other tissues See more
    Orthologs
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    Genomic context

    See Dennd11 in Genome Data Viewer
    Location:
    6; 6 B1
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (40378309..40413069, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (40401375..40436135, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 6 NC_000072.5 (40357497..40386132, complement)

    Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene aldolase A, fructose-bisphosphate pseudogene Neighboring gene transmembrane protein 178B Neighboring gene acylglycerol kinase Neighboring gene WEE1 homolog 2 (S. pombe) Neighboring gene taste receptor, type 2, member 137 Neighboring gene single-stranded DNA binding protein 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables guanyl-nucleotide exchange factor activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables molecular_function ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 

    General protein information

    Preferred Names
    DENN domain-containing protein 11
    Names
    protein LCHN

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001356375.1NP_001343304.1  DENN domain-containing protein 11

      Status: VALIDATED

      Source sequence(s)
      AC153728
      Consensus CDS
      CCDS90040.1
      Related
      ENSMUSP00000099031.4, ENSMUST00000101492.10
      Conserved Domains (1) summary
      pfam09804
      Location:80346
      DUF2347; Uncharacterized conserved protein (DUF2347)

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000072.7 Reference GRCm39 C57BL/6J

      Range
      40378309..40413069 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_133929.1: Suppressed sequence

      Description
      NM_133929.1: This RefSeq record was removed by NCBI staff. Contact info@ncbi.nlm.nih.gov for further information.
    2. NM_175528.4: Suppressed sequence

      Description
      NM_175528.4: This RefSeq was removed because currently there is insufficient support for the transcript and the protein.
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