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    Dcaf10 DDB1 and CUL4 associated factor 10 [ Mus musculus (house mouse) ]

    Gene ID: 242418, updated on 31-Jan-2019

    Summary

    Official Symbol
    Dcaf10provided by MGI
    Official Full Name
    DDB1 and CUL4 associated factor 10provided by MGI
    Primary source
    MGI:MGI:2140179
    See related
    Ensembl:ENSMUSG00000035572
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Wdr32; AA959934
    Expression
    Ubiquitous expression in adrenal adult (RPKM 5.1), ovary adult (RPKM 3.6) and 28 other tissues See more
    Orthologs

    Genomic context

    See Dcaf10 in Genome Data Viewer
    Location:
    4; 4 B1
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 4 NC_000070.6 (45342094..45379732)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 4 NC_000070.5 (45354973..45392594)

    Chromosome 4 - NC_000070.6Genomic Context describing neighboring genes Neighboring gene predicted gene, 31017 Neighboring gene predicted gene 12585 Neighboring gene solute carrier family 25, member 51 Neighboring gene predicted gene, 46852

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (2) 

    General gene information

    Markers

    Homology

    Clone Names

    • MGC11993, MGC103038

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    Cul4-RING E3 ubiquitin ligase complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Cul4-RING E3 ubiquitin ligase complex ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    DDB1- and CUL4-associated factor 10
    Names
    WD repeat domain 32
    WD repeat-containing protein 32

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_153167.2NP_694807.2  DDB1- and CUL4-associated factor 10

      See identical proteins and their annotated locations for NP_694807.2

      Status: VALIDATED

      Source sequence(s)
      AK083428, AL772376, BX526643, BY732400, CN533345
      Consensus CDS
      CCDS38754.1
      UniProtKB/Swiss-Prot
      A2AKB9
      Related
      ENSMUSP00000117082.1, ENSMUST00000155551.7
      Conserved Domains (4) summary
      smart00320
      Location:524562
      WD40; WD40 repeats
      COG2319
      Location:178326
      WD40; WD40 repeat [General function prediction only]
      sd00039
      Location:179214
      7WD40; WD40 repeat [structural motif]
      cl02567
      Location:171326
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000070.6 Reference GRCm38.p4 C57BL/6J

      Range
      45342094..45379732
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006537912.3XP_006537975.1  DDB1- and CUL4-associated factor 10 isoform X1

      Conserved Domains (3) summary
      smart00320
      Location:458496
      WD40; WD40 repeats
      COG2319
      Location:176496
      WD40; WD40 repeat [General function prediction only]
      cl02567
      Location:171230
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
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