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    Natd1 N-acetyltransferase domain containing 1 [ Mus musculus (house mouse) ]

    Gene ID: 24083, updated on 23-Jun-2021

    Summary

    Official Symbol
    Natd1provided by MGI
    Official Full Name
    N-acetyltransferase domain containing 1provided by MGI
    Primary source
    MGI:MGI:1344388
    See related
    Ensembl:ENSMUSG00000018931
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    F3-2; Gtlf3; Gtlf3b; Gm16515; AI256713
    Expression
    Ubiquitous expression in ovary adult (RPKM 27.2), mammary gland adult (RPKM 23.1) and 28 other tissues See more
    Orthologs
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    Genomic context

    See Natd1 in Genome Data Viewer
    Location:
    11; 11 B2
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (60793072..60804618, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (60902246..60913792, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 11 NC_000077.5 (60715748..60727294, complement)

    Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene transmembrane protein 11 Neighboring gene predicted gene, 26534 Neighboring gene predicted gene, 39830 Neighboring gene mitogen-activated protein kinase kinase 3, opposite strand Neighboring gene mitogen-activated protein kinase kinase 3

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (2) 

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    protein NATD1
    Names
    N-acetyltransferase domain-containing protein 1
    gene trap locus F3b
    gene trap locus protein F3-2
    gene trap locus protein F3b
    protein GTLF3B

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_025294.5NP_079570.1  protein NATD1

      See identical proteins and their annotated locations for NP_079570.1

      Status: VALIDATED

      Source sequence(s)
      AK004720, AK080453, BY196792
      Consensus CDS
      CCDS24802.1
      UniProtKB/Swiss-Prot
      Q9DBW3
      Related
      ENSMUSP00000019075.4, ENSMUST00000019075.4
      Conserved Domains (1) summary
      pfam14542
      Location:26100
      Acetyltransf_CG; GCN5-related N-acetyl-transferase

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000077.7 Reference GRCm39 C57BL/6J

      Range
      60793072..60804618 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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