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    Fem1c fem-1 homolog c (C.elegans) [ Mus musculus (house mouse) ]

    Gene ID: 240263, updated on 31-Jan-2019

    Summary

    Official Symbol
    Fem1cprovided by MGI
    Official Full Name
    fem-1 homolog c (C.elegans)provided by MGI
    Primary source
    MGI:MGI:2444737
    See related
    Ensembl:ENSMUSG00000033319
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    AI646567; 2610312A07Rik; 3632443A22Rik
    Expression
    Broad expression in testis adult (RPKM 52.8), placenta adult (RPKM 7.9) and 18 other tissues See more
    Orthologs

    Genomic context

    See Fem1c in Genome Data Viewer
    Location:
    18; 18 C
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 18 NC_000084.6 (46504606..46525971, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 18 NC_000084.5 (46664260..46685625, complement)

    Chromosome 18 - NC_000084.6Genomic Context describing neighboring genes Neighboring gene predicted gene, 32288 Neighboring gene motile sperm domain containing 4 Neighboring gene 60S ribosomal protein L7a pseudogene Neighboring gene toll-like receptor adaptor molecule 2 Neighboring gene RAD51 homolog c pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    cytosol ISO
    Inferred from Sequence Orthology
    more info
     
    nucleoplasm ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    protein fem-1 homolog C
    Names
    FEM1-gamma

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_173423.4NP_775599.1  protein fem-1 homolog C

      See identical proteins and their annotated locations for NP_775599.1

      Status: PROVISIONAL

      Source sequence(s)
      AC148017
      Consensus CDS
      CCDS29231.1
      UniProtKB/Swiss-Prot
      Q8CEF1
      UniProtKB/TrEMBL
      B2RRW5
      Related
      ENSMUSP00000038816.5, ENSMUST00000036226.5
      Conserved Domains (4) summary
      cd00204
      Location:73202
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      pfam12796
      Location:87178
      Ank_2; Ankyrin repeats (3 copies)
      pfam13637
      Location:482548
      Ank_4; Ankyrin repeats (many copies)
      sd00045
      Location:118146
      ANK; ANK repeat [structural motif]

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000084.6 Reference GRCm38.p4 C57BL/6J

      Range
      46504606..46525971 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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