Format

Send to:

Choose Destination
    • Showing Current items.

    Ccdc14 coiled-coil domain containing 14 [ Mus musculus (house mouse) ]

    Gene ID: 239839, updated on 22-Aug-2021

    Summary

    Official Symbol
    Ccdc14provided by MGI
    Official Full Name
    coiled-coil domain containing 14provided by MGI
    Primary source
    MGI:MGI:2443448
    See related
    Ensembl:ENSMUSG00000022833
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    G630039H03Rik
    Expression
    Broad expression in CNS E11.5 (RPKM 3.3), testis adult (RPKM 2.7) and 26 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Ccdc14 in Genome Data Viewer
    Location:
    16; 16 B3
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 16 NC_000082.7 (34510940..34545574)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 16 NC_000082.6 (34690557..34725204)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 16 NC_000082.5 (34690702..34725280)

    Chromosome 16 - NC_000082.7Genomic Context describing neighboring genes Neighboring gene kalirin, RhoGEF kinase Neighboring gene predicted gene, 41448 Neighboring gene ropporin, rhophilin associated protein 1 Neighboring gene predicted gene, 35150 Neighboring gene myosin, light polypeptide kinase Neighboring gene RIKEN cDNA 1700119H24 gene Neighboring gene predicted gene, 53951

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (1) 

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in protein localization to centrosome IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    involved_in protein localization to centrosome ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    is_active_in centriolar satellite IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    located_in centriolar satellite ISO
    Inferred from Sequence Orthology
    more info
     
    located_in centrosome ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    coiled-coil domain-containing protein 14

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_172824.3NP_766412.2  coiled-coil domain-containing protein 14

      See identical proteins and their annotated locations for NP_766412.2

      Status: VALIDATED

      Source sequence(s)
      AC154456, BB615458, BB618371, CF742918, DV661299
      Consensus CDS
      CCDS49837.1
      UniProtKB/Swiss-Prot
      Q8K2J4
      Related
      ENSMUSP00000023532.7, ENSMUST00000023532.7
      Conserved Domains (2) summary
      pfam13863
      Location:534636
      DUF4200; Domain of unknown function (DUF4200)
      pfam15254
      Location:96934
      CCDC14; Coiled-coil domain-containing protein 14

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000082.7 Reference GRCm39 C57BL/6J

      Range
      34510940..34545574
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_036159922.1XP_036015815.1  coiled-coil domain-containing protein 14 isoform X1

      Conserved Domains (1) summary
      pfam15254
      Location:96627
      CCDC14; Coiled-coil domain-containing protein 14
    2. XM_011245891.4XP_011244193.1  coiled-coil domain-containing protein 14 isoform X2

      See identical proteins and their annotated locations for XP_011244193.1

      Conserved Domains (1) summary
      pfam15254
      Location:96510
      CCDC14; Coiled-coil domain-containing protein 14
    3. XM_030249111.1XP_030104971.1  coiled-coil domain-containing protein 14 isoform X3

      Conserved Domains (1) summary
      pfam15254
      Location:2498
      CCDC14; Coiled-coil domain-containing protein 14

    RNA

    1. XR_384564.4 RNA Sequence

    2. XR_003951790.2 RNA Sequence

    3. XR_004939191.1 RNA Sequence

    Support Center