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    Fiz1 Flt3 interacting zinc finger protein 1 [ Mus musculus (house mouse) ]

    Gene ID: 23877, updated on 23-Jun-2021

    Summary

    Official Symbol
    Fiz1provided by MGI
    Official Full Name
    Flt3 interacting zinc finger protein 1provided by MGI
    Primary source
    MGI:MGI:1344336
    See related
    Ensembl:ENSMUSG00000061374
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    AI790204; mFLJ00416
    Expression
    Ubiquitous expression in thymus adult (RPKM 19.0), ovary adult (RPKM 16.5) and 28 other tissues See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See Fiz1 in Genome Data Viewer
    Location:
    7; 7 A1
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (5010055..5017727, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (5007056..5014728, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 7 NC_000073.5 (4958658..4966330, complement)

    Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene zinc finger protein 579 Neighboring gene predicted gene, 53351 Neighboring gene zinc finger protein 524 Neighboring gene zinc finger protein 865

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Gene trapped (1) 

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Clone Names

    • FLJ00416, MGC117900

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables receptor tyrosine kinase binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within positive regulation of protein phosphorylation IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in chromatin IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    flt3-interacting zinc finger protein 1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001110328.2NP_001103798.1  flt3-interacting zinc finger protein 1

      See identical proteins and their annotated locations for NP_001103798.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) differs in the 5' UTR compared to variant 5. All seven variants encode the same protein.
      Source sequence(s)
      AC157563
      Consensus CDS
      CCDS20751.1
      UniProtKB/Swiss-Prot
      Q9WTJ4
      UniProtKB/TrEMBL
      Q3TRV0
      Related
      ENSMUSP00000128105.2, ENSMUST00000165320.3
      Conserved Domains (2) summary
      sd00017
      Location:420440
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:432457
      zf-H2C2_2; Zinc-finger double domain
    2. NM_001110329.1NP_001103799.1  flt3-interacting zinc finger protein 1

      See identical proteins and their annotated locations for NP_001103799.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (3) differs in the 5' UTR compared to variant 5. All seven variants encode the same protein.
      Source sequence(s)
      AK142205, AW045450, CJ131593
      Consensus CDS
      CCDS20751.1
      UniProtKB/Swiss-Prot
      Q9WTJ4
      UniProtKB/TrEMBL
      Q3TRV0
      Related
      ENSMUSP00000076603.8, ENSMUST00000077385.15
      Conserved Domains (2) summary
      sd00017
      Location:420440
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:432457
      zf-H2C2_2; Zinc-finger double domain
    3. NM_001110330.1NP_001103800.1  flt3-interacting zinc finger protein 1

      See identical proteins and their annotated locations for NP_001103800.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (4) differs in the 5' UTR compared to variant 5. All seven variants encode the same protein.
      Source sequence(s)
      AK142205, AW045450, BU053482
      Consensus CDS
      CCDS20751.1
      UniProtKB/Swiss-Prot
      Q9WTJ4
      UniProtKB/TrEMBL
      Q3TRV0
      Related
      ENSMUSP00000147011.2, ENSMUST00000208944.2
      Conserved Domains (2) summary
      sd00017
      Location:420440
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:432457
      zf-H2C2_2; Zinc-finger double domain
    4. NM_001360241.1NP_001347170.1  flt3-interacting zinc finger protein 1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (5) represents the longest transcript. All seven variants encode the same protein.
      Source sequence(s)
      AC157563, BY203086
      Consensus CDS
      CCDS20751.1
      Conserved Domains (2) summary
      sd00017
      Location:420440
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:432457
      zf-H2C2_2; Zinc-finger double domain
    5. NM_001360242.1NP_001347171.1  flt3-interacting zinc finger protein 1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (6) differs in the 5' UTR compared to variant 5. All seven variants encode the same protein.
      Source sequence(s)
      AC157563, BC138232
      Consensus CDS
      CCDS20751.1
      Related
      ENSMUSP00000147082.2, ENSMUST00000207030.2
      Conserved Domains (2) summary
      sd00017
      Location:420440
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:432457
      zf-H2C2_2; Zinc-finger double domain
    6. NM_001360243.1NP_001347172.1  flt3-interacting zinc finger protein 1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (7) differs in the 5' UTR compared to variant 5. All seven variants encode the same protein.
      Source sequence(s)
      AC157563
      Consensus CDS
      CCDS20751.1
      Conserved Domains (2) summary
      sd00017
      Location:420440
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:432457
      zf-H2C2_2; Zinc-finger double domain
    7. NM_011813.3NP_035943.3  flt3-interacting zinc finger protein 1

      See identical proteins and their annotated locations for NP_035943.3

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 5. All seven variants encode the same protein.
      Source sequence(s)
      AC157563, AK142205, AW045450
      Consensus CDS
      CCDS20751.1
      UniProtKB/Swiss-Prot
      Q9WTJ4
      UniProtKB/TrEMBL
      Q3TRV0
      Related
      ENSMUSP00000126765.2, ENSMUST00000167804.9
      Conserved Domains (2) summary
      sd00017
      Location:420440
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:432457
      zf-H2C2_2; Zinc-finger double domain

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000073.7 Reference GRCm39 C57BL/6J

      Range
      5010055..5017727 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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