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    Btbd7 BTB (POZ) domain containing 7 [ Mus musculus (house mouse) ]

    Gene ID: 238386, updated on 31-Jan-2019

    Summary

    Official Symbol
    Btbd7provided by MGI
    Official Full Name
    BTB (POZ) domain containing 7provided by MGI
    Primary source
    MGI:MGI:1917858
    See related
    Ensembl:ENSMUSG00000041702
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    FUP1; mKIAA1525; 8030448M07; 5730507E09Rik; E130118E17Rik
    Expression
    Ubiquitous expression in limb E14.5 (RPKM 6.7), bladder adult (RPKM 6.5) and 28 other tissues See more
    Orthologs

    Genomic context

    See Btbd7 in Genome Data Viewer
    Location:
    12; 12 E
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 12 NC_000078.6 (102780797..102879989, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 12 NC_000078.5 (104022858..104116616, complement)

    Chromosome 12 - NC_000078.6Genomic Context describing neighboring genes Neighboring gene predicted gene 20604 Neighboring gene cytochrome c oxidase subunit 7C, mitochondrial pseudogene Neighboring gene GON7, KEOPS complex subunit homolog Neighboring gene ubiquitin protein ligase E3 component n-recognin 7 (putative) Neighboring gene ribosomal protein S2 pseudogene Neighboring gene cytochrome c oxidase subunit 8C Neighboring gene unc-79 homolog Neighboring gene predicted gene, 46372

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    General gene information

    Markers

    Homology

    Clone Names

    • MGC49574

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    multicellular organism development IEA
    Inferred from Electronic Annotation
    more info
     
    regulation of branching involved in salivary gland morphogenesis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    BTB/POZ domain-containing protein 7
    Names
    function-unkown protein 1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_172806.2NP_766394.2  BTB/POZ domain-containing protein 7

      See identical proteins and their annotated locations for NP_766394.2

      Status: PROVISIONAL

      Source sequence(s)
      BC041669
      Consensus CDS
      CCDS26125.1
      UniProtKB/Swiss-Prot
      Q8CFE5
      Related
      ENSMUSP00000152426.1, ENSMUST00000223554.1
      Conserved Domains (4) summary
      smart00225
      Location:268397
      BTB; Broad-Complex, Tramtrack and Bric a brac
      smart00875
      Location:410488
      BACK; BTB And C-terminal Kelch
      pfam00651
      Location:134235
      BTB; BTB/POZ domain
      cl02518
      Location:269393
      BTB; BTB/POZ domain

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000078.6 Reference GRCm38.p4 C57BL/6J

      Range
      102780797..102879989 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006515855.3XP_006515918.1  BTB/POZ domain-containing protein 7 isoform X1

      See identical proteins and their annotated locations for XP_006515918.1

      UniProtKB/Swiss-Prot
      Q8CFE5
      Related
      ENSMUSP00000046951.6, ENSMUST00000045652.7
      Conserved Domains (4) summary
      smart00225
      Location:268397
      BTB; Broad-Complex, Tramtrack and Bric a brac
      smart00875
      Location:410488
      BACK; BTB And C-terminal Kelch
      pfam00651
      Location:134235
      BTB; BTB/POZ domain
      cl02518
      Location:269393
      BTB; BTB/POZ domain
    2. XM_011244108.2XP_011242410.1  BTB/POZ domain-containing protein 7 isoform X2

      Conserved Domains (1) summary
      pfam15440
      Location:424587
      THRAP3_BCLAF1; THRAP3/BCLAF1 family
    3. XM_017315063.1XP_017170552.1  BTB/POZ domain-containing protein 7 isoform X3

      Conserved Domains (4) summary
      smart00225
      Location:268397
      BTB; Broad-Complex, Tramtrack and Bric a brac
      smart00875
      Location:410488
      BACK; BTB And C-terminal Kelch
      pfam00651
      Location:134235
      BTB; BTB/POZ domain
      cl02518
      Location:269393
      BTB; BTB/POZ domain
    4. XM_006515856.3XP_006515919.1  BTB/POZ domain-containing protein 7 isoform X4

      Conserved Domains (3) summary
      smart00225
      Location:143230
      BTB; Broad-Complex, Tramtrack and Bric a brac
      pfam00651
      Location:134235
      BTB; BTB/POZ domain
      cl02518
      Location:269340
      BTB; BTB/POZ domain
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