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    Ankrd52 ankyrin repeat domain 52 [ Mus musculus (house mouse) ]

    Gene ID: 237615, updated on 31-Jan-2019

    Summary

    Official Symbol
    Ankrd52provided by MGI
    Official Full Name
    ankyrin repeat domain 52provided by MGI
    Primary source
    MGI:MGI:2444029
    See related
    Ensembl:ENSMUSG00000014498
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    6430544C07; G431002C21Rik
    Expression
    Ubiquitous expression in thymus adult (RPKM 25.9), ovary adult (RPKM 24.4) and 28 other tissues See more
    Orthologs

    Genomic context

    See Ankrd52 in Genome Data Viewer
    Location:
    10; 10 D3
    Exon count:
    28
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 10 NC_000076.6 (128377124..128394006)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 10 NC_000076.5 (127814180..127831062)

    Chromosome 10 - NC_000076.6Genomic Context describing neighboring genes Neighboring gene citrate synthase Neighboring gene coenzyme Q10A Neighboring gene microRNA 6914 Neighboring gene microRNA 6915 Neighboring gene solute carrier family 39 (metal ion transporter), member 5 Neighboring gene nucleic acid binding protein 2

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 

    General gene information

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C
    Names
    PP6-ARS-C
    serine/threonine-protein phosphatase 6 regulatory subunit ARS-C

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_172790.2NP_766378.1  serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C

      See identical proteins and their annotated locations for NP_766378.1

      Status: PROVISIONAL

      Source sequence(s)
      AC090489
      Consensus CDS
      CCDS24274.1
      UniProtKB/Swiss-Prot
      Q8BTI7
      Related
      ENSMUSP00000014642.3, ENSMUST00000014642.9
      Conserved Domains (5) summary
      cd00204
      Location:417570
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      sd00045
      Location:108137
      ANK; ANK repeat [structural motif]
      pfam13637
      Location:791843
      Ank_4; Ankyrin repeats (many copies)
      cl26072
      Location:9621029
      Ank_5; Ankyrin repeats (many copies)
      cl26073
      Location:20317
      Ank_2; Ankyrin repeats (3 copies)

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000076.6 Reference GRCm38.p4 C57BL/6J

      Range
      128377124..128394006
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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