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    Atosa atos homolog A [ Mus musculus (house mouse) ]

    Gene ID: 235493, updated on 26-Sep-2022

    Summary

    Official Symbol
    Atosaprovided by MGI
    Official Full Name
    atos homolog Aprovided by MGI
    Primary source
    MGI:MGI:2387648
    See related
    Ensembl:ENSMUSG00000034858 AllianceGenome:MGI:2387648
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Fam214a; Kiaa1370; mKIAA1370; 6330415I01Rik; C130047D21Rik
    Summary
    Is expressed in endocrine gland; hindlimb mesenchyme; jaw; rib; and testis. Orthologous to human FAM214A (family with sequence similarity 214 member A). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Ubiquitous expression in subcutaneous fat pad adult (RPKM 5.9), frontal lobe adult (RPKM 5.6) and 28 other tissues See more
    Orthologs
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    Genomic context

    See Atosa in Genome Data Viewer
    Location:
    9; 9 D
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 9 NC_000075.7 (74860162..74939750)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 9 NC_000075.6 (74952867..75032468)

    Chromosome 9 - NC_000075.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 33562 Neighboring gene predicted gene 16551 Neighboring gene one cut domain, family member 1 Neighboring gene predicted gene, 38678 Neighboring gene microRNA 1970c Neighboring gene predicted gene, 51714 Neighboring gene cAMP-regulated phosphoprotein 19 Neighboring gene apoptosis inhibitor 5 pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 

    General gene information

    Markers

    Homology

    Clone Names

    • MGC38960, MGC41344

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    protein FAM214A
    Names
    family with sequence similarity 214, member A

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001113283.1NP_001106754.1  protein FAM214A isoform 1

      See identical proteins and their annotated locations for NP_001106754.1

      Status: VALIDATED

      Source sequence(s)
      CT025657, CT033761
      Consensus CDS
      CCDS52857.1
      UniProtKB/Swiss-Prot
      Q69ZK7, Q8K266
      Related
      ENSMUSP00000129319.2, ENSMUST00000170846.8
      Conserved Domains (2) summary
      pfam13915
      Location:878935
      DUF4210; Domain of unknown function (DUF4210)
      pfam13889
      Location:10171074
      Chromosome_seg; Chromosome segregation during meiosis
    2. NM_001359816.1NP_001346745.1  protein FAM214A isoform 1

      Status: VALIDATED

      Source sequence(s)
      CT025657, CT033761
      Consensus CDS
      CCDS52857.1
      UniProtKB/Swiss-Prot
      Q8K266
      Conserved Domains (2) summary
      pfam13915
      Location:878935
      DUF4210; Domain of unknown function (DUF4210)
      pfam13889
      Location:10171074
      Chromosome_seg; Chromosome segregation during meiosis
    3. NM_153584.2NP_705812.2  protein FAM214A isoform 2

      Status: VALIDATED

      Source sequence(s)
      AW990238, BC031353, BU057452
      Consensus CDS
      CCDS52858.1
      UniProtKB/Swiss-Prot
      Q69ZK7
      Related
      ENSMUSP00000080442.6, ENSMUST00000081746.7
      Conserved Domains (2) summary
      pfam13889
      Location:10241081
      Chromosome_seg; Chromosome segregation during meiosis
      pfam13915
      Location:885942
      DUF4210; Domain of unknown function (DUF4210)

    RNA

    1. NR_153342.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      CT025657, CT033761

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000075.7 Reference GRCm39 C57BL/6J

      Range
      74860162..74939750
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006511126.5XP_006511189.1  protein FAM214A isoform X1

      See identical proteins and their annotated locations for XP_006511189.1

      UniProtKB/Swiss-Prot
      Q69ZK7, Q8K266
      Related
      ENSMUSP00000149021.2, ENSMUST00000215370.2
      Conserved Domains (2) summary
      pfam13915
      Location:878935
      DUF4210; Domain of unknown function (DUF4210)
      pfam13889
      Location:10171074
      Chromosome_seg; Chromosome segregation during meiosis
    2. XM_036154910.1XP_036010803.1  protein FAM214A isoform X2

      Conserved Domains (2) summary
      pfam13889
      Location:929986
      Chromosome_seg; Chromosome segregation during meiosis
      pfam13915
      Location:790847
      DUF4210; Domain of unknown function (DUF4210)

    RNA

    1. XR_001778884.3 RNA Sequence

    2. XR_379417.5 RNA Sequence