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    Fam214a family with sequence similarity 214, member A [ Mus musculus (house mouse) ]

    Gene ID: 235493, updated on 31-Jan-2019

    Summary

    Official Symbol
    Fam214aprovided by MGI
    Official Full Name
    family with sequence similarity 214, member Aprovided by MGI
    Primary source
    MGI:MGI:2387648
    See related
    Ensembl:ENSMUSG00000034858
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    AI553555; Kiaa1370; mKIAA1370; 6330415I01Rik; C130047D21Rik
    Expression
    Ubiquitous expression in subcutaneous fat pad adult (RPKM 5.9), frontal lobe adult (RPKM 5.6) and 28 other tissues See more
    Orthologs

    Genomic context

    See Fam214a in Genome Data Viewer
    Location:
    9; 9 D
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 9 NC_000075.6 (74952853..75032468)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 9 NC_000075.5 (74800860..74880275)

    Chromosome 9 - NC_000075.6Genomic Context describing neighboring genes Neighboring gene predicted gene, 33562 Neighboring gene predicted gene 16551 Neighboring gene one cut domain, family member 1 Neighboring gene predicted gene, 38678 Neighboring gene cAMP-regulated phosphoprotein 19 Neighboring gene apoptosis inhibitor 5 pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Markers

    Homology

    Clone Names

    • MGC38960, MGC41344

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    cellular_component ND
    No biological Data available
    more info
     

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001113283.1NP_001106754.1  protein FAM214A isoform 1

      See identical proteins and their annotated locations for NP_001106754.1

      Status: VALIDATED

      Source sequence(s)
      CT025657, CT033761
      Consensus CDS
      CCDS52857.1
      UniProtKB/Swiss-Prot
      Q69ZK7
      Related
      ENSMUSP00000129319.1, ENSMUST00000170846.7
      Conserved Domains (2) summary
      pfam13889
      Location:10171073
      Chromosome_seg; Chromosome segregation during meiosis
      pfam13915
      Location:878935
      DUF4210; Domain of unknown function (DUF4210)
    2. NM_001359816.1NP_001346745.1  protein FAM214A isoform 1

      Status: VALIDATED

      Source sequence(s)
      CT025657, CT033761
      Conserved Domains (2) summary
      pfam13889
      Location:10171073
      Chromosome_seg; Chromosome segregation during meiosis
      pfam13915
      Location:878935
      DUF4210; Domain of unknown function (DUF4210)
    3. NM_153584.2NP_705812.2  protein FAM214A isoform 2

      Status: VALIDATED

      Source sequence(s)
      AW990238, BC031353, BU057452
      Consensus CDS
      CCDS52858.1
      UniProtKB/Swiss-Prot
      Q69ZK7
      Related
      ENSMUSP00000080442.5, ENSMUST00000081746.6
      Conserved Domains (2) summary
      pfam13889
      Location:10241081
      Chromosome_seg; Chromosome segregation during meiosis
      pfam13915
      Location:885942
      DUF4210; Domain of unknown function (DUF4210)

    RNA

    1. NR_153342.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      CT025657, CT033761

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000075.6 Reference GRCm38.p4 C57BL/6J

      Range
      74952853..75032468
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006511127.3XP_006511190.1  protein FAM214A isoform X1

      UniProtKB/Swiss-Prot
      Q69ZK7
      Conserved Domains (2) summary
      pfam13889
      Location:10171073
      Chromosome_seg; Chromosome segregation during meiosis
      pfam13915
      Location:878935
      DUF4210; Domain of unknown function (DUF4210)
    2. XM_006511126.3XP_006511189.1  protein FAM214A isoform X1

      See identical proteins and their annotated locations for XP_006511189.1

      UniProtKB/Swiss-Prot
      Q69ZK7
      Related
      ENSMUSP00000149021.1, ENSMUST00000215370.1
      Conserved Domains (2) summary
      pfam13889
      Location:10171073
      Chromosome_seg; Chromosome segregation during meiosis
      pfam13915
      Location:878935
      DUF4210; Domain of unknown function (DUF4210)

    RNA

    1. XR_379418.3 RNA Sequence

    2. XR_001778884.1 RNA Sequence

    3. XR_379417.3 RNA Sequence

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